MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3339c · 46 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
icd1 (requalified) — NADP-dependent isocitrate dehydrogenase icd1 acn (requalified) — iron-regulated aconitate hydratase Acn acn Rv1248c (family_assigned) — multifunctional oxoglutarate decarboxylase/oxoglut Rv1248c icd2 (requalified) — NADP-dependent isocitrate dehydrogenase icd2 Rv2455c (family_assigned) — 2-oxoacid:acceptor oxidoreductase subunit alpha Rv2455c Rv2454c (family_assigned) — 2-oxoacid:ferredoxin oxidoreductase subunit beta Rv2454c mdh (requalified) — malate dehydrogenase mdh gcvB (requalified) — aminomethyl-transferring glycine dehydrogenase gcvB aspC (requalified) — pyridoxal phosphate-dependent aminotransferase aspC gltB (family_assigned) — glutamate synthase large subunit gltB sucC (family_assigned) — ADP-forming succinate--CoA ligase subunit beta sucC purB (requalified) — adenylosuccinate lyase purB gabD1 (requalified) — succinate-semialdehyde dehydrogenase gabD1 prpC (requalified) — 2-methylcitrate synthase prpC citA (requalified) — citrate synthase 2 citA gltA2 (requalified) — citrate synthase gltA2 icl1 (requalified) — isocitrate lyase icl1 lpdC (requalified) — dihydrolipoyl dehydrogenase lpdC Rv0794c (requalified) — oxidoreductase Rv0794c garA (requalified) — glycogen accumulation regulator GarA garA sthA (requalified) — Si-specific NAD(P)(+) transhydrogenase sthA mtr (requalified) — mycothione reductase mtr lpdA (requalified) — NAD(P)H-quinone dehydrogenase lpdA aroF (requalified) — chorismate synthase aroF pta (requalified) — phosphate acetyltransferase pta sucD (family_assigned) — succinyl-CoA ligase subunit alpha sucD mobA (requalified) — molybdenum cofactor guanylyltransferase mobA pykA (requalified) — pyruvate kinase pykA fum (requalified) — class II fumarate hydratase fum mez (requalified) — NAD-dependent malic enzyme mez pca (requalified) — pyruvate carboxylase pca gcvH (requalified) — glycine cleavage system protein GcvH gcvH gcvT (requalified) — aminomethyltransferase gcvT glyA1 (requalified) — serine hydroxymethyltransferase glyA1 glyA2 (requalified) — serine hydroxymethyltransferase glyA2 purD (requalified) — phosphoribosylamine--glycine ligase purD ilvD (requalified) — dihydroxy-acid dehydratase ilvD leuA (requalified) — 2-isopropylmalate synthase leuA argJ (requalified) — bifunctional glutamate N-acetyltransferase/amino-a argJ ilvE (requalified) — branched-chain amino acid aminotransferase ilvE gdh (requalified) — NAD-glutamate dehydrogenase gdh ald (requalified) — alanine dehydrogenase ald gltD (family_assigned) — glutamate synthase subunit beta gltD fprA (requalified) — ferredoxin--NADP(+) reductase FprA fprA fadH (requalified) — NADPH-dependent 2%2C4-dienoyl-CoA reductase fadH fprB (requalified) — FAD-dependent oxidoreductase fprB

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.