MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3338 · 46 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv3338 (family_assigned) — Conserved hypothetical protein Rv3338 Rv3337 (family_assigned) — Conserved hypothetical protein Rv3337 Rv0885 (requalified) — diiron oxygenase Rv0885 rsdA (requalified) — anti-sigma D factor RsdA rsdA trpS (requalified) — tryptophan--tRNA ligase trpS Rv0210 (family_assigned) — hypothetical protein Rv0210 fprB (requalified) — FAD-dependent oxidoreductase fprB Rv3071 (family_assigned) — DUF190 domain-containing protein Rv3071 Rv2716 (family_assigned) — PhzF family phenazine biosynthesis protein Rv2716 yhjD (requalified) — inner membrane protein YhjD yhjD Rv0479c (family_assigned) — DUF2993 domain-containing protein Rv0479c rsbW (requalified) — anti-sigma B factor RsbW rsbW Rv0227c (family_assigned) — membrane protein Rv0227c pks12 (requalified) — type I polyketide synthase pks12 ppsC (requalified) — phthiocerol type I polyketide synthase PpsC ppsC pks5 (requalified) — sulfolipid-1 biosynthesis phthioceranic/hydroxypht pks5 serC (requalified) — phosphoserine transaminase serC Rv3249c (family_assigned) — TetR family transcriptional regulator Rv3249c sepH (requalified) — septation protein SepH sepH Rv0464c (family_assigned) — carboxymuconolactone decarboxylase family protein Rv0464c sigD (requalified) — ECF RNA polymerase sigma factor SigD sigD Rv3415c (family_assigned) — hypothetical protein Rv3415c Rv0556 (family_assigned) — DUF3592 domain-containing protein Rv0556 Rv2360c (family_assigned) — hypothetical protein Rv2360c Rv0996 (family_assigned) — hypothetical protein Rv0996 pmmB (requalified) — phospho-sugar mutase pmmB pheT (family_assigned) — phenylalanine--tRNA ligase subunit beta pheT serS (requalified) — serine--tRNA ligase serS Rv0209 (family_assigned) — hypothetical protein Rv0209 trmB (requalified) — tRNA (guanosine(46)-N7)-methyltransferase TrmB trmB Rv0207c (family_assigned) — NYN domain-containing protein Rv0207c Rv2474c (family_assigned) — hypothetical protein Rv2474c Rv2687c (family_assigned) — fluoroquinolone transporter permease Rv2687c gltB (family_assigned) — glutamate synthase large subunit gltB Rv1937 (requalified) — FAD-binding oxidoreductase Rv1937 fprA (requalified) — ferredoxin--NADP(+) reductase FprA fprA Rv2455c (family_assigned) — 2-oxoacid:acceptor oxidoreductase subunit alpha Rv2455c fdxB (requalified) — fatty acid desaturase fdxB crcB (requalified) — fluoride efflux transporter CrcB crcB crcB (requalified) — fluoride efflux transporter CrcB crcB pgmA (requalified) — phosphoglucomutase (alpha-D-glucose-1%2C6-bisphosp pgmA Rv0441c (family_assigned) — pyridoxamine 5'-phosphate oxidase family protein Rv0441c Rv2715 (family_assigned) — alpha/beta hydrolase Rv2715 Rv2714 (family_assigned) — PAC2 family protein Rv2714 Rv1592c (family_assigned) — lipase family protein Rv1592c Rv3013 (family_assigned) — amino acid-binding protein Rv3013

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.