MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3335c · 46 genes shown · anchor trpS · open gene page → · ← back to 1 hop

Evidence: Min score 0
yhjD (requalified) — inner membrane protein YhjD yhjD trpS (requalified) — tryptophan--tRNA ligase trpS Rv3013 (family_assigned) — amino acid-binding protein Rv3013 Rv3337 (family_assigned) — Conserved hypothetical protein Rv3337 Rv3338 (family_assigned) — Conserved hypothetical protein Rv3338 Rv3753c (family_assigned) — hypothetical protein Rv3753c Rv2446c (dark) — DUF4233 domain-containing protein Rv2446c Rv1332 (family_assigned) — transcriptional regulator Rv1332 tatB (requalified) — Sec-independent protein translocase protein TatB tatB Rv1109c (requalified) — lipid droplet-associated protein Rv1109c Rv2712c (dark) — DUF4192 domain-containing protein Rv2712c chaA (requalified) — calcium:proton antiporter chaA Rv0556 (family_assigned) — DUF3592 domain-containing protein Rv0556 pmmB (requalified) — phospho-sugar mutase pmmB pheT (family_assigned) — phenylalanine--tRNA ligase subunit beta pheT serS (requalified) — serine--tRNA ligase serS rpsD (requalified) — 30S ribosomal protein S4 rpsD rplB (requalified) — 50S ribosomal protein L2 rplB rpmE (requalified) — 50S ribosomal protein L31 rpmE rpsO (requalified) — 30S ribosomal protein S15 rpsO rplO (requalified) — 50S ribosomal protein L15 rplO rpsE (requalified) — 30S ribosomal protein S5 rpsE pks12 (requalified) — type I polyketide synthase pks12 ppsC (requalified) — phthiocerol type I polyketide synthase PpsC ppsC pks5 (requalified) — sulfolipid-1 biosynthesis phthioceranic/hydroxypht pks5 Rv0885 (requalified) — diiron oxygenase Rv0885 rsdA (requalified) — anti-sigma D factor RsdA rsdA Rv0210 (family_assigned) — hypothetical protein Rv0210 fprB (requalified) — FAD-dependent oxidoreductase fprB Rv3752c (requalified) — nucleoside deaminase Rv3752c tyrA (requalified) — prephenate dehydrogenase TyrA tyrA Rv3311 (family_assigned) — primosomal protein Rv3311 Rv3438 (family_assigned) — alpha/beta hydrolase Rv3438 folC (requalified) — bifunctional tetrahydrofolate synthase/dihydrofola folC valS (requalified) — valine--tRNA ligase valS Rv2732c (family_assigned) — hypothetical protein Rv2732c Rv3205c (family_assigned) — hypothetical protein Rv3205c Rv0863 (family_assigned) — hypothetical protein Rv0863 mec (requalified) — CysO-cysteine peptidase mec clpS (requalified) — ATP-dependent Clp protease adapter ClpS clpS Rv1333 (family_assigned) — P1 family peptidase Rv1333 Rv1337 (family_assigned) — rhomboid family intramembrane serine protease Rv1337 cysM (requalified) — O-phosphoserine sulfhydrylase cysM cysO (requalified) — sulfur carrier protein CysO cysO htrA (requalified) — serine protease HtrA htrA guaA (requalified) — glutamine-hydrolyzing GMP synthase guaA

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.