MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3334 · 46 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv3334 (family_assigned) — hypoxia response transcriptional regulator Rv3334 Rv0792c (family_assigned) — GntR family transcriptional regulator Rv0792c Rv2017 (family_assigned) — ImmA/IrrE family metallo-endopeptidase Rv2017 dnaJ2 (requalified) — molecular chaperone DnaJ dnaJ2 dnaJ1 (requalified) — chaperone protein DnaJ dnaJ1 glnA1 (requalified) — type I glutamate--ammonia ligase glnA1 glnA2 (family_assigned) — glutamine synthetase family protein glnA2 glnA3 (family_assigned) — glutamine synthetase family protein glnA3 glnA4 (family_assigned) — glutamine synthetase family protein glnA4 sigB (family_assigned) — sigma-70 family RNA polymerase sigma factor SigB sigB rpoA (family_assigned) — DNA-directed RNA polymerase subunit alpha rpoA sigA (requalified) — RNA polymerase sigma factor sigA rpoZ (family_assigned) — DNA-directed RNA polymerase subunit omega rpoZ Rv0790c (family_assigned) — transglutaminase-like domain-containing protein Rv0790c Rv0791c (requalified) — LLM class flavin-dependent oxidoreductase Rv0791c Rv0494 (family_assigned) — HTH-type transcriptional regulator Rv0494 Rv3833 (family_assigned) — helix-turn-helix transcriptional regulator Rv3833 Rv3060c (family_assigned) — FCD domain-containing protein Rv3060c Rv3183 (family_assigned) — XRE family transcriptional regulator Rv3183 Rv2016 (dark) — hypothetical protein Rv2016 Rv2912c (family_assigned) — TetR/AcrR family transcriptional regulator Rv2912c mce3R (family_assigned) — TetR family transcriptional regulator Mce3R mce3R Rv3066 (family_assigned) — TetR/AcrR family transcriptional regulator Rv3066 Rv2011c (family_assigned) — MarR family winged helix-turn-helix transcriptiona Rv2011c dnaK (requalified) — molecular chaperone DnaK dnaK Rv2372c (requalified) — 16S rRNA (uracil(1498)-N(3))-methyltransferase Rv2372c htpG (requalified) — molecular chaperone HtpG htpG Rv2264c (family_assigned) — Hsp70 family protein Rv2264c hrcA (requalified) — heat-inducible transcriptional repressor HrcA hrcA Rv3446c (family_assigned) — type VII secretion-associated protein Rv3446c grpE (requalified) — nucleotide exchange factor GrpE grpE hspR (family_assigned) — heat shock transcriptional regulator HspR hspR Rv0312 (family_assigned) — Hsp70 family protein Rv0312 gltB (family_assigned) — glutamate synthase large subunit gltB glmS (requalified) — glutamine--fructose-6-phosphate transaminase (isom glmS gltD (family_assigned) — glutamate synthase subunit beta gltD carA (family_assigned) — glutamine-hydrolyzing carbamoyl-phosphate synthase carA carB (family_assigned) — carbamoyl-phosphate synthase large subunit carB rocA (requalified) — L-glutamate gamma-semialdehyde dehydrogenase rocA purF (requalified) — amidophosphoribosyltransferase purF Rv1879 (family_assigned) — amidohydrolase family protein Rv1879 Rv2857c (requalified) — 3-oxoacyl-ACP reductase Rv2857c Rv2859c (requalified) — gamma-glutamyl-gamma-aminobutyrate hydrolase Rv2859c aldC (requalified) — aldehyde dehydrogenase AldC aldC rpoB (family_assigned) — DNA-directed RNA polymerase subunit beta rpoB rpoC (family_assigned) — DNA-directed RNA polymerase subunit beta' rpoC

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.