MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3333c · 46 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
prp1 (requalified) — PDZ-interacting protease regulator Ppr1 prp1 fas (requalified) — fatty acid synthase fas Rv1135A (family_assigned) — Possible acetyl-CoA acetyltransferase (acetoacetyl Rv1135A fadA5 (requalified) — steroid 3-ketoacyl-CoA thiolase fadA5 fadA6 (requalified) — acetyl-CoA C-acetyltransferase fadA6 ltp2 (requalified) — lipid-transfer protein ltp2 ltp3 (family_assigned) — thiolase domain-containing protein ltp3 Rv1627c (requalified) — lipid-transfer protein Rv1627c fadA2 (requalified) — acetyl-CoA C-acetyltransferase fadA2 ltp4 (family_assigned) — thiolase domain-containing protein ltp4 ltp1 (requalified) — lipid-transfer protein ltp1 fadA (requalified) — acetyl-CoA C-acetyltransferase fadA Rv1867 (requalified) — acetyl-CoA acetyltransferase Rv1867 pks7 (requalified) — type I polyketide synthase pks7 pks17 (requalified) — polyketide synthase pks17 pks2 (requalified) — phthioceranic/hydroxyphthioceranic acid synthase pks2 mas (requalified) — mycocerosate synthase mas accD3 (family_assigned) — carboxyl transferase domain-containing protein accD3 pks6 (requalified) — membrane bound polyketide synthase pks6 fadB (requalified) — fatty oxidation protein FadB fadB Rv1136 (family_assigned) — Possible enoyl-CoA hydratase Rv1136 celA2a (family_assigned) — Probable cellulase CelA2a (endo-1,4-beta-glucanase celA2a tcrA (family_assigned) — two component DNA binding transcriptional regulato tcrA Rv3840 (family_assigned) — transcriptional regulator Rv3840 Rv3167c (family_assigned) — TetR/AcrR family transcriptional regulator Rv3167c fadB2 (requalified) — 3-hydroxybutyryl-CoA dehydrogenase FadB2 fadB2 fadB3 (requalified) — 3-hydroxybutyryl-CoA dehydrogenase FadB fadB3 fadE29 (requalified) — acyl-CoA dehydrogenase FadE29 fadE29 chsH2 (family_assigned) — 3-oxo-23%2C24-bisnorchol-4%2C17(20)-dien-22-oyl-Co chsH2 fadE28 (requalified) — acyl-CoA dehydrogenase FadE28 fadE28 acs (requalified) — acetate--CoA ligase acs scoB (family_assigned) — succinyl-CoA--3-ketoacid CoA transferase subunit B scoB glcB (requalified) — malate synthase G glcB chsH1 (family_assigned) — 3-oxo-23%2C24-bisnorchol-4%2C17(20)-dien-22-oyl-Co chsH1 Rv3521 (family_assigned) — hypothetical protein Rv3521 Rv0914c (requalified) — acetyl-CoA acetyltransferase Rv0914c Rv1628c (family_assigned) — Zn-ribbon domain-containing OB-fold protein Rv1628c echA5 (requalified) — enoyl-CoA hydratase EchA5 echA5 echA15 (family_assigned) — enoyl-CoA hydratase/isomerase family protein echA15 echA3 (family_assigned) — crotonase/enoyl-CoA hydratase family protein echA3 echA10 (requalified) — enoyl-CoA hydratase echA10 htdX (requalified) — 3-hydroxyacyl-thioester dehydratase HtdX htdX fabG4 (requalified) — 3-oxoacyl-ACP reductase fabG4 echA20 (family_assigned) — enoyl-CoA hydratase family protein echA20 fadE21 (family_assigned) — acyl-CoA dehydrogenase family protein fadE21 fadE4 (family_assigned) — acyl-CoA dehydrogenase family protein fadE4

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.