MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3332 · 46 genes shown · anchor sugI · open gene page → · ← back to 1 hop

Evidence: Min score 0
nagA (requalified) — N-acetylglucosamine-6-phosphate deacetylase nagA sugI (requalified) — sugar-transport integral membrane protein SugI sugI glmS (requalified) — glutamine--fructose-6-phosphate transaminase (isom glmS mrsA (requalified) — phosphoglucosamine mutase mrsA devB (requalified) — 6-phosphogluconolactonase devB Rv0669c (requalified) — neutral ceramidase Rv0669c Rv3242c (family_assigned) — ComF family protein Rv3242c Rv0792c (family_assigned) — GntR family transcriptional regulator Rv0792c dacB1 (requalified) — D-alanyl-D-alanine carboxypeptidase DacB1 dacB1 Rv1321 (requalified) — endonuclease NucS Rv1321 Rv3329 (requalified) — aminotransferase Rv3329 apt (requalified) — adenine phosphoribosyltransferase apt lpqI (requalified) — lipoprotein LpqI lpqI Rv1672c (requalified) — MFS transporter Rv1672c cycA (requalified) — amino acid permease cycA mmpL9 (requalified) — RND transporter MmpL9 mmpL9 gltB (family_assigned) — glutamate synthase large subunit gltB glnA2 (family_assigned) — glutamine synthetase family protein glnA2 carB (family_assigned) — carbamoyl-phosphate synthase large subunit carB glnA1 (requalified) — type I glutamate--ammonia ligase glnA1 glnA3 (family_assigned) — glutamine synthetase family protein glnA3 glmU (requalified) — bifunctional UDP-N-acetylglucosamine diphosphoryla glmU Rv3440c (family_assigned) — hypothetical protein Rv3440c Rv3439c (family_assigned) — hypothetical protein Rv3439c rpsI (requalified) — 30S ribosomal protein S9 rpsI zwf2 (requalified) — glucose-6-phosphate dehydrogenase zwf2 zwf1 (requalified) — glucose-6-phosphate 1-dehydrogenase zwf1 opcA (requalified) — glucose-6-phosphate dehydrogenase assembly protein opcA gnd2 (requalified) — decarboxylating 6-phosphogluconate dehydrogenase gnd2 gnd1 (requalified) — 6-phosphogluconate dehydrogenase gnd1 tal (requalified) — transaldolase tal end (requalified) — deoxyribonuclease IV end dnaE1 (family_assigned) — DNA polymerase III subunit alpha dnaE1 dnaE2 (requalified) — error-prone DNA polymerase dnaE2 xerC (requalified) — tyrosine recombinase XerC xerC Rv1364c (family_assigned) — sigma factor regulatory protein Rv1364c tyrA (requalified) — prephenate dehydrogenase TyrA tyrA hemY (requalified) — protoporphyrinogen oxidase hemY Rv0790c (family_assigned) — transglutaminase-like domain-containing protein Rv0790c Rv0791c (requalified) — LLM class flavin-dependent oxidoreductase Rv0791c Rv0494 (family_assigned) — HTH-type transcriptional regulator Rv0494 Rv3833 (family_assigned) — helix-turn-helix transcriptional regulator Rv3833 Rv3060c (family_assigned) — FCD domain-containing protein Rv3060c Rv3183 (family_assigned) — XRE family transcriptional regulator Rv3183 dacB2 (family_assigned) — penicillin-binding protein DacB2 dacB2 dacB (requalified) — D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-ala dacB

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.