MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3331 · 46 genes shown · anchor nagA · open gene page → · ← back to 1 hop

Evidence: Min score 0
sugI (requalified) — sugar-transport integral membrane protein SugI sugI nagA (requalified) — N-acetylglucosamine-6-phosphate deacetylase nagA dacB1 (requalified) — D-alanyl-D-alanine carboxypeptidase DacB1 dacB1 Rv3329 (requalified) — aminotransferase Rv3329 Rv1672c (requalified) — MFS transporter Rv1672c cycA (requalified) — amino acid permease cycA mmpL9 (requalified) — RND transporter MmpL9 mmpL9 Rv1674c (family_assigned) — metalloregulator ArsR/SmtB family transcription fa Rv1674c hisC2 (requalified) — histidinol-phosphate transaminase hisC2 gabD2 (requalified) — succinic semialdehyde dehydrogenase gabD2 darT (requalified) — toxin-antitoxin system toxin DarT darT Rv0759c (family_assigned) — hypothetical protein Rv0759c hsr1 (requalified) — hypothetical protein hsr1 glmS (requalified) — glutamine--fructose-6-phosphate transaminase (isom glmS mrsA (requalified) — phosphoglucosamine mutase mrsA devB (requalified) — 6-phosphogluconolactonase devB Rv0669c (requalified) — neutral ceramidase Rv0669c Rv3242c (family_assigned) — ComF family protein Rv3242c dacB2 (family_assigned) — penicillin-binding protein DacB2 dacB2 dacB (requalified) — D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-ala dacB ponA1 (requalified) — bifunctional penicillin-insensitive transglycosyla ponA1 sigJ (family_assigned) — sigma-70 family RNA polymerase sigma factor SigJ sigJ bioB (requalified) — biotin synthase BioB bioB bioD (requalified) — dethiobiotin synthase bioD bioF1 (requalified) — 8-amino-7-oxononanoate synthase bioF1 Rv1673c (family_assigned) — transglutaminase family protein Rv1673c nanT (family_assigned) — sialate:H+ symport family MFS transporter nanT glpK (requalified) — glycerol kinase GlpK glpK Rv1192 (family_assigned) — alpha/beta hydrolase Rv1192 PPE22 (family_assigned) — PPE family protein PPE22 PPE22 Rv1703c (requalified) — O-methyltransferase Rv1703c PPE23 (family_assigned) — PPE family protein PPE23 PPE23 Rv1979c (family_assigned) — APC family permease Rv1979c Rv1598c (family_assigned) — nitroreductase family deazaflavin-dependent oxidor Rv1598c Rv1303 (family_assigned) — ATP synthase subunit I Rv1303 eccD3 (family_assigned) — type VII secretion system ESX-3 subunit EccD3 eccD3 lppX (requalified) — LppX_LprAFG lipoprotein lppX Rv0128 (family_assigned) — YoaK family protein Rv0128 eccB3 (family_assigned) — type VII secretion system ESX-3 subunit EccB3 eccB3 cmr (family_assigned) — HTH-type transcriptional regulator Cmr cmr Rv1931c (family_assigned) — transcriptional regulator Rv1931c Rv3167c (family_assigned) — TetR/AcrR family transcriptional regulator Rv3167c Rv0494 (family_assigned) — HTH-type transcriptional regulator Rv0494 embR (requalified) — response regulator transcription factor EmbR embR nadR (requalified) — nicotinamide-nucleotide adenylyltransferase nadR hisB (requalified) — imidazoleglycerol-phosphate dehydratase HisB hisB

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.