MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3330 · 46 genes shown · anchor nagA · open gene page → · ← back to 1 hop

Evidence: Min score 0
dacB1 (requalified) — D-alanyl-D-alanine carboxypeptidase DacB1 dacB1 dacB2 (family_assigned) — penicillin-binding protein DacB2 dacB2 dacB (requalified) — D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-ala dacB nagA (requalified) — N-acetylglucosamine-6-phosphate deacetylase nagA sugI (requalified) — sugar-transport integral membrane protein SugI sugI Rv3329 (requalified) — aminotransferase Rv3329 ponA1 (requalified) — bifunctional penicillin-insensitive transglycosyla ponA1 rodA (requalified) — cell shape-determining peptidoglycan glycosyltrans rodA ldtB (requalified) — L%2CD-transpeptidase LdtMt2 ldtB Rv0192 (family_assigned) — hypothetical protein Rv0192 sigJ (family_assigned) — sigma-70 family RNA polymerase sigma factor SigJ sigJ Rv2864c (family_assigned) — penicillin-binding protein Rv2864c pbpB (requalified) — D%2CD-transpeptidase PbpB pbpB Rv2910c (family_assigned) — hypothetical protein Rv2910c Rv3626c (requalified) — zinc-dependent metalloprotease Rv3626c mesJ (requalified) — tRNA lysidine(34) synthetase TilS mesJ hpt (requalified) — hypoxanthine phosphoribosyltransferase hpt ppa (requalified) — inorganic diphosphatase ppa glmS (requalified) — glutamine--fructose-6-phosphate transaminase (isom glmS mrsA (requalified) — phosphoglucosamine mutase mrsA devB (requalified) — 6-phosphogluconolactonase devB Rv0669c (requalified) — neutral ceramidase Rv0669c Rv3242c (family_assigned) — ComF family protein Rv3242c Rv1672c (requalified) — MFS transporter Rv1672c cycA (requalified) — amino acid permease cycA mmpL9 (requalified) — RND transporter MmpL9 mmpL9 bioB (requalified) — biotin synthase BioB bioB bioD (requalified) — dethiobiotin synthase bioD bioF1 (requalified) — 8-amino-7-oxononanoate synthase bioF1 Rv0051 (family_assigned) — glycosyltransferase family 87 protein Rv0051 pbpA (requalified) — D%2CD-transpeptidase PbpA pbpA rpsF (requalified) — 30S ribosomal protein S6 rpsF Rv0052 (family_assigned) — hypothetical protein Rv0052 wag31 (requalified) — cell wall synthesis protein Wag31 wag31 pknB (family_assigned) — Stk1 family PASTA domain-containing Ser/Thr kinase pknB pknA (requalified) — serine/threonine protein kinase PknA pknA pstP (requalified) — phosphoserine/threonine phosphatase PstP pstP fhaB (family_assigned) — FHA domain-containing protein fhaB Rv3015c (requalified) — methionine synthase Rv3015c Rv2413c (family_assigned) — DNA polymerase III subunit delta Rv2413c glfT2 (requalified) — galactofuranosyl transferase GlfT2 glfT2 aftC (requalified) — arabinofuranan 3-O-arabinosyltransferase aftC Rv0191 (family_assigned) — Rv0191 family MFS efflux transporter Rv0191 ponA2 (requalified) — bifunctional penicillin-insensitive transglycosyla ponA2 Rv1931c (family_assigned) — transcriptional regulator Rv1931c Rv1725c (family_assigned) — winged helix-turn-helix transcriptional regulator Rv1725c

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.