MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3319 · 26 genes shown · anchor sdhD · open gene page → · ← back to 1 hop

Evidence: Min score 0
sdhB (family_assigned) — succinate dehydrogenase iron-sulfur subunit sdhB sdhD (family_assigned) — succinate dehydrogenase hydrophobic membrane ancho sdhD sdhA (family_assigned) — succinate dehydrogenase flavoprotein subunit sdhA sdhC (family_assigned) — succinate dehydrogenase%2C cytochrome b556 subunit sdhC frdA (family_assigned) — fumarate reductase (quinol) flavoprotein subunit frdA Rv0248c (family_assigned) — fumarate reductase/succinate dehydrogenase flavopr Rv0248c sucC (family_assigned) — ADP-forming succinate--CoA ligase subunit beta sucC sucD (family_assigned) — succinyl-CoA ligase subunit alpha sucD frdC (family_assigned) — fumarate reductase subunit C frdC frdD (family_assigned) — fumarate reductase subunit FrdD frdD Rv1248c (family_assigned) — multifunctional oxoglutarate decarboxylase/oxoglut Rv1248c fum (requalified) — class II fumarate hydratase fum gabD2 (requalified) — succinic semialdehyde dehydrogenase gabD2 frdB (family_assigned) — succinate dehydrogenase iron-sulfur subunit frdB Rv0247c (family_assigned) — succinate dehydrogenase/fumarate reductase iron-su Rv0247c Rv0249c (family_assigned) — succinate dehydrogenase membrane anchor subunit Rv0249c dlaT (requalified) — 2-oxoglutarate dehydrogenase%2C E2 component%2C di dlaT lpdC (requalified) — dihydrolipoyl dehydrogenase lpdC Rv0794c (requalified) — oxidoreductase Rv0794c garA (requalified) — glycogen accumulation regulator GarA garA sthA (requalified) — Si-specific NAD(P)(+) transhydrogenase sthA mtr (requalified) — mycothione reductase mtr lpdA (requalified) — NAD(P)H-quinone dehydrogenase lpdA mdh (requalified) — malate dehydrogenase mdh gabT (requalified) — 4-aminobutyrate--2-oxoglutarate transaminase gabT gabD1 (requalified) — succinate-semialdehyde dehydrogenase gabD1

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.