MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3316 · 28 genes shown · anchor sdhA · open gene page → · ← back to 1 hop

Evidence: Min score 0
sdhC (family_assigned) — succinate dehydrogenase%2C cytochrome b556 subunit sdhC sdhA (family_assigned) — succinate dehydrogenase flavoprotein subunit sdhA sdhB (family_assigned) — succinate dehydrogenase iron-sulfur subunit sdhB sdhD (family_assigned) — succinate dehydrogenase hydrophobic membrane ancho sdhD frdB (family_assigned) — succinate dehydrogenase iron-sulfur subunit frdB Rv0247c (family_assigned) — succinate dehydrogenase/fumarate reductase iron-su Rv0247c frdA (family_assigned) — fumarate reductase (quinol) flavoprotein subunit frdA Rv0248c (family_assigned) — fumarate reductase/succinate dehydrogenase flavopr Rv0248c sucC (family_assigned) — ADP-forming succinate--CoA ligase subunit beta sucC sucD (family_assigned) — succinyl-CoA ligase subunit alpha sucD Rv1248c (family_assigned) — multifunctional oxoglutarate decarboxylase/oxoglut Rv1248c kstD (requalified) — 3-oxosteroid 1-dehydrogenase kstD Rv1817 (family_assigned) — FAD-binding protein Rv1817 fum (requalified) — class II fumarate hydratase fum frdD (family_assigned) — fumarate reductase subunit FrdD frdD frdC (family_assigned) — fumarate reductase subunit C frdC Rv0249c (family_assigned) — succinate dehydrogenase membrane anchor subunit Rv0249c dlaT (requalified) — 2-oxoglutarate dehydrogenase%2C E2 component%2C di dlaT lpdC (requalified) — dihydrolipoyl dehydrogenase lpdC Rv0794c (requalified) — oxidoreductase Rv0794c garA (requalified) — glycogen accumulation regulator GarA garA sthA (requalified) — Si-specific NAD(P)(+) transhydrogenase sthA mtr (requalified) — mycothione reductase mtr lpdA (requalified) — NAD(P)H-quinone dehydrogenase lpdA Rv3538 (requalified) — dehydrogenase Rv3538 kshA (family_assigned) — 3-ketosteroid-9-alpha-hydroxylase subunit KshA kshA Rv0760c (family_assigned) — ketosteroid isomerase family protein Rv0760c kshB (family_assigned) — 3-ketosteroid-9-alpha-hydroxylase reductase subuni kshB

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.