MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3314c · 46 genes shown · anchor cdd · open gene page → · ← back to 1 hop

Evidence: Min score 0
deoA (requalified) — thymidine phosphorylase deoA cdd (requalified) — cytidine deaminase cdd upp (requalified) — uracil phosphoribosyltransferase upp deoD (requalified) — purine-nucleoside phosphorylase deoD deoC (requalified) — deoxyribose-phosphate aldolase deoC add (requalified) — adenosine deaminase add pyrR (family_assigned) — bifunctional pyr operon transcriptional regulator/ pyrR sdhD (family_assigned) — succinate dehydrogenase hydrophobic membrane ancho sdhD sdhC (family_assigned) — succinate dehydrogenase%2C cytochrome b556 subunit sdhC sdhA (family_assigned) — succinate dehydrogenase flavoprotein subunit sdhA sdhB (family_assigned) — succinate dehydrogenase iron-sulfur subunit sdhB iniC (requalified) — isoniazid-induced dynamin-like GTPase IniC iniC era (requalified) — GTPase Era era pyrH (requalified) — UMP kinase pyrH pyrF (requalified) — orotidine-5'-phosphate decarboxylase pyrF rpiB (requalified) — ribose-5-phosphate isomerase B rpiB guaA (requalified) — glutamine-hydrolyzing GMP synthase guaA pmmB (requalified) — phospho-sugar mutase pmmB apt (requalified) — adenine phosphoribosyltransferase apt hpt (requalified) — hypoxanthine phosphoribosyltransferase hpt rbsK (requalified) — ribokinase RbsK rbsK tkt (requalified) — transketolase tkt tal (requalified) — transaldolase tal fba (requalified) — class II fructose-bisphosphate aldolase fba Rv0476 (requalified) — transmembrane protein Rv0476 adoK (family_assigned) — carbohydrate kinase family protein adoK iunH (requalified) — nucleoside hydrolase IunH iunH pyrB (family_assigned) — aspartate carbamoyltransferase catalytic subunit pyrB pyrC (requalified) — dihydroorotase pyrC carB (family_assigned) — carbamoyl-phosphate synthase large subunit carB carA (family_assigned) — glutamine-hydrolyzing carbamoyl-phosphate synthase carA Rv1382 (requalified) — transporter Rv1382 frdB (family_assigned) — succinate dehydrogenase iron-sulfur subunit frdB frdA (family_assigned) — fumarate reductase (quinol) flavoprotein subunit frdA Rv0247c (family_assigned) — succinate dehydrogenase/fumarate reductase iron-su Rv0247c fum (requalified) — class II fumarate hydratase fum Rv0248c (family_assigned) — fumarate reductase/succinate dehydrogenase flavopr Rv0248c sucC (family_assigned) — ADP-forming succinate--CoA ligase subunit beta sucC iniA (requalified) — isoniazid inductible protein IniA iniA rpsF (requalified) — 30S ribosomal protein S6 rpsF rpsP (requalified) — 30S ribosomal protein S16 rpsP rpsG (requalified) — 30S ribosomal protein S7 rpsG rpsI (requalified) — 30S ribosomal protein S9 rpsI iniR (family_assigned) — isoniazid response ATPase/transcriptional regulato iniR Rv2365c (requalified) — cytidine deaminase Rv2365c Rv2367c (requalified) — endoribonuclease Rv2367c

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.