MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3312A · 46 genes shown · anchor add · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv3312A (requalified) — pilin Rv3312A add (requalified) — adenosine deaminase add deoA (requalified) — thymidine phosphorylase deoA cdd (requalified) — cytidine deaminase cdd Rv3312c (family_assigned) — alpha/beta hydrolase Rv3312c Rv0309 (requalified) — L%2CD-transpeptidase Rv0309 Rv1824 (family_assigned) — small basic family protein Rv1824 Rv3717 (family_assigned) — hypothetical protein Rv3717 mrsA (requalified) — phosphoglucosamine mutase mrsA hbhA (requalified) — heparin-binding hemagglutinin HbhA hbhA Rv2296 (requalified) — haloalkane dehalogenase Rv2296 moeW (family_assigned) — ThiF family adenylyltransferase moeW Rv0021c (family_assigned) — nitronate monooxygenase family protein Rv0021c deoD (requalified) — purine-nucleoside phosphorylase deoD adoK (family_assigned) — carbohydrate kinase family protein adoK iunH (requalified) — nucleoside hydrolase IunH iunH sdhC (family_assigned) — succinate dehydrogenase%2C cytochrome b556 subunit sdhC upp (requalified) — uracil phosphoribosyltransferase upp deoC (requalified) — deoxyribose-phosphate aldolase deoC pyrR (family_assigned) — bifunctional pyr operon transcriptional regulator/ pyrR sdhD (family_assigned) — succinate dehydrogenase hydrophobic membrane ancho sdhD pks2 (requalified) — phthioceranic/hydroxyphthioceranic acid synthase pks2 pks12 (requalified) — type I polyketide synthase pks12 pks5 (requalified) — sulfolipid-1 biosynthesis phthioceranic/hydroxypht pks5 mas (requalified) — mycocerosate synthase mas ppsC (requalified) — phthiocerol type I polyketide synthase PpsC ppsC Rv1043c (requalified) — serine protease Rv1043c Rv0308 (family_assigned) — phosphatase PAP2 family protein Rv0308 Rv1303 (family_assigned) — ATP synthase subunit I Rv1303 Rv0307c (family_assigned) — hypothetical protein Rv0307c Rv0185 (family_assigned) — TIGR04338 family metallohydrolase Rv0185 Rv0184 (dark) — DUF2786 domain-containing protein Rv0184 mmpL5 (requalified) — siderophore RND transporter MmpL5 mmpL5 Rv1823 (family_assigned) — DUF881 domain-containing protein Rv1823 Rv1825 (family_assigned) — DUF881 domain-containing protein Rv1825 pgsA2 (family_assigned) — CDP-alcohol phosphatidyltransferase family protein pgsA2 Rv0012 (family_assigned) — membrane protein Rv0012 gcvH (requalified) — glycine cleavage system protein GcvH gcvH secA2 (requalified) — accessory Sec system translocase SecA2 secA2 Rv3915 (requalified) — peptidoglycan hydrolase Rv3915 Rv0063 (requalified) — FAD-binding oxidoreductase Rv0063 Rv3209 (family_assigned) — MmpS family transport accessory protein Rv3209 Rv3096 (requalified) — 1%2C4-beta-xylanase Rv3096 Rv3716c (family_assigned) — YbaB/EbfC family nucleoid-associated protein Rv3716c recR (requalified) — recombination mediator RecR recR glmU (requalified) — bifunctional UDP-N-acetylglucosamine diphosphoryla glmU

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.