MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3311 · 45 genes shown · anchor sapM · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv3311 (family_assigned) — primosomal protein Rv3311 sapM (requalified) — phosphatidylinositol-3-phosphatase sapM Rv1109c (requalified) — lipid droplet-associated protein Rv1109c Rv3212 (family_assigned) — hypothetical protein Rv3212 Rv3438 (family_assigned) — alpha/beta hydrolase Rv3438 Rv2520c (dark) — DUF3618 domain-containing protein Rv2520c Rv2446c (dark) — DUF4233 domain-containing protein Rv2446c Rv0863 (family_assigned) — hypothetical protein Rv0863 Rv1209 (family_assigned) — DivIVA domain-containing protein Rv1209 Rv0556 (family_assigned) — DUF3592 domain-containing protein Rv0556 Rv0996 (family_assigned) — hypothetical protein Rv0996 Rv0358 (requalified) — peptidase M50 Rv0358 Rv2170 (requalified) — N-acetyltransferase Rv2170 plcA (requalified) — membrane-associated phospholipase A plcA plcC (requalified) — phospholipase C plcC plcB (requalified) — membrane-associated phospholipase B plcB upp (requalified) — uracil phosphoribosyltransferase upp xseA (family_assigned) — exodeoxyribonuclease VII large subunit xseA xseB (family_assigned) — exodeoxyribonuclease VII small subunit xseB Rv1106c (requalified) — 3 beta-hydroxysteroid dehydrogenase/delta 5-->4-is Rv1106c lytB2 (requalified) — 4-hydroxy-3-methylbut-2-enyl diphosphate reductase lytB2 Rv2091c (family_assigned) — DUF4333 domain-containing protein Rv2091c Rv3850 (family_assigned) — DUF6474 family protein Rv3850 rhlE (requalified) — DEAD/DEAH box helicase rhlE Rv3205c (family_assigned) — hypothetical protein Rv3205c lppL (family_assigned) — hypothetical protein lppL Rv3437 (dark) — DUF2510 domain-containing protein Rv3437 bcp (requalified) — thioredoxin-dependent thiol peroxidase bcp rseA (requalified) — anti-sigma E factor RseA rseA cfp6 (requalified) — low molecular weight protein antigen 6 cfp6 folC (requalified) — bifunctional tetrahydrofolate synthase/dihydrofola folC valS (requalified) — valine--tRNA ligase valS Rv2732c (family_assigned) — hypothetical protein Rv2732c Rv2876 (requalified) — transmembrane protein Rv2876 ctaD (family_assigned) — cytochrome c oxidase subunit I ctaD qcrB (family_assigned) — cytochrome bc complex cytochrome b subunit qcrB Rv2199c (family_assigned) — cytochrome c oxidase subunit 4 Rv2199c ctaE (family_assigned) — heme-copper oxidase subunit III ctaE qcrA (requalified) — hypothetical protein qcrA ponA2 (requalified) — bifunctional penicillin-insensitive transglycosyla ponA2 tagA (requalified) — DNA-3-methyladenine glycosylase I tagA folP2 (requalified) — dihydropteroate synthase folP2 gpgS (requalified) — glucosyl-3-phosphoglycerate synthase gpgS menD (requalified) — 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1 menD bpoC (family_assigned) — alpha/beta hydrolase bpoC

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.