MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3296 · 45 genes shown · anchor nei · open gene page → · ← back to 1 hop

Evidence: Min score 0
lhr (requalified) — ATP-dependent helicase lhr nei (requalified) — endonuclease VIII Nei2 nei Rv3295 (family_assigned) — TetR/AcrR family transcriptional regulator Rv3295 Rv3555c (family_assigned) — DUF559 domain-containing protein Rv3555c radA (requalified) — DNA repair protein RadA radA Rv2191 (family_assigned) — hypothetical protein Rv2191 Rv3242c (family_assigned) — ComF family protein Rv3242c pcd (requalified) — piperideine-6-carboxylic acid dehydrogenase pcd adnA (requalified) — ATP-dependent DNA helicase AdnA adnA Rv3294c (family_assigned) — hypothetical protein Rv3294c disA (requalified) — DNA integrity scanning diadenylate cyclase DisA disA ligD (requalified) — non-homologous end-joining DNA ligase ligD Rv0269c (requalified) — DNA polymerase domain-containing protein Rv0269c Rv2464c (family_assigned) — Fpg/Nei family DNA glycosylase Rv2464c polA (requalified) — DNA polymerase I polA Rv0210 (family_assigned) — hypothetical protein Rv0210 papA3 (requalified) — acyltransferase PapA3 papA3 fadA6 (requalified) — acetyl-CoA C-acetyltransferase fadA6 Rv0804 (family_assigned) — CPBP family intramembrane glutamic endopeptidase Rv0804 recX (requalified) — recombination regulator RecX recX thiL (requalified) — thiamine-phosphate kinase thiL recA (requalified) — intein-containing recombinase RecA recA uvrB (family_assigned) — excinuclease ABC subunit UvrB uvrB Rv3644c (family_assigned) — DNA polymerase III subunit delta' Rv3644c dnaN (family_assigned) — DNA polymerase III subunit beta dnaN dnaE1 (family_assigned) — DNA polymerase III subunit alpha dnaE1 dnaZX (family_assigned) — DNA polymerase III subunits gamma/tau dnaZX Rv2413c (family_assigned) — DNA polymerase III subunit delta Rv2413c xerC (requalified) — tyrosine recombinase XerC xerC Rv1364c (family_assigned) — sigma factor regulatory protein Rv1364c tyrA (requalified) — prephenate dehydrogenase TyrA tyrA apt (requalified) — adenine phosphoribosyltransferase apt hemY (requalified) — protoporphyrinogen oxidase hemY nagA (requalified) — N-acetylglucosamine-6-phosphate deacetylase nagA Rv3292 (family_assigned) — VOC family protein Rv3292 acs (requalified) — acetate--CoA ligase acs gabT (requalified) — 4-aminobutyrate--2-oxoglutarate transaminase gabT ackA (requalified) — acetate kinase ackA fadB (requalified) — fatty oxidation protein FadB fadB adhE1 (family_assigned) — zinc-type alcohol dehydrogenase subunit E adhE1 adnB (requalified) — ATP-dependent DNA helicase AdnB adnB uvrD2 (requalified) — ATP-dependent DNA helicase UvrD2 uvrD2 nudC (requalified) — NAD(+) diphosphatase nudC Rv3200c (family_assigned) — potassium channel family protein Rv3200c lprP (family_assigned) — LppA family lipoprotein lprP

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.