MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3295 · 45 genes shown · anchor lhr · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv3295 (family_assigned) — TetR/AcrR family transcriptional regulator Rv3295 lhr (requalified) — ATP-dependent helicase lhr nei (requalified) — endonuclease VIII Nei2 nei Rv3294c (family_assigned) — hypothetical protein Rv3294c Rv0210 (family_assigned) — hypothetical protein Rv0210 pcd (requalified) — piperideine-6-carboxylic acid dehydrogenase pcd papA3 (requalified) — acyltransferase PapA3 papA3 Rv3405c (family_assigned) — helix-turn-helix domain-containing protein Rv3405c lrpA (family_assigned) — transcriptional regulator LrpA lrpA Rv1978 (requalified) — class I SAM-dependent methyltransferase Rv1978 mce1A (family_assigned) — Mce family protein Mce1A mce1A papA1 (requalified) — acyltransferase PapA1 papA1 Rv1006 (family_assigned) — hypothetical protein Rv1006 Rv3555c (family_assigned) — DUF559 domain-containing protein Rv3555c radA (requalified) — DNA repair protein RadA radA Rv2191 (family_assigned) — hypothetical protein Rv2191 Rv3242c (family_assigned) — ComF family protein Rv3242c Rv2464c (family_assigned) — Fpg/Nei family DNA glycosylase Rv2464c polA (requalified) — DNA polymerase I polA lprP (family_assigned) — LppA family lipoprotein lprP Rv0919 (family_assigned) — GNAT family N-acetyltransferase Rv0919 Rv0209 (family_assigned) — hypothetical protein Rv0209 trmB (requalified) — tRNA (guanosine(46)-N7)-methyltransferase TrmB trmB Rv0207c (family_assigned) — NYN domain-containing protein Rv0207c Rv2474c (family_assigned) — hypothetical protein Rv2474c rsdA (requalified) — anti-sigma D factor RsdA rsdA Rv2687c (family_assigned) — fluoroquinolone transporter permease Rv2687c Rv3292 (family_assigned) — VOC family protein Rv3292 acs (requalified) — acetate--CoA ligase acs gabT (requalified) — 4-aminobutyrate--2-oxoglutarate transaminase gabT ackA (requalified) — acetate kinase ackA fadB (requalified) — fatty oxidation protein FadB fadB adhE1 (family_assigned) — zinc-type alcohol dehydrogenase subunit E adhE1 pks4 (requalified) — polyketide beta-ketoacyl synthase pks4 mmpL10 (requalified) — RND transporter MmpL10 mmpL10 pks3 (requalified) — polyketide beta-ketoacyl synthase pks3 pks2 (requalified) — phthioceranic/hydroxyphthioceranic acid synthase pks2 pks5 (requalified) — sulfolipid-1 biosynthesis phthioceranic/hydroxypht pks5 mas (requalified) — mycocerosate synthase mas cobB (requalified) — NAD-dependent protein deacylase cobB Rv3406 (requalified) — alpha-ketoglutarate-dependent sulfate ester dioxyg Rv3406 Rv3183 (family_assigned) — XRE family transcriptional regulator Rv3183 Rv2282c (family_assigned) — LysR family transcriptional regulator Rv2282c Rv3066 (family_assigned) — TetR/AcrR family transcriptional regulator Rv3066 Rv3840 (family_assigned) — transcriptional regulator Rv3840

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.