MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3292 · 31 genes shown · anchor pcd · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv3292 (family_assigned) — VOC family protein Rv3292 pcd (requalified) — piperideine-6-carboxylic acid dehydrogenase pcd lrpA (family_assigned) — transcriptional regulator LrpA lrpA lat (requalified) — L-lysine 6-transaminase lat Rv3289c (dark) — hypothetical protein Rv3289c usfY (family_assigned) — hypothetical protein usfY gdh (requalified) — NAD-glutamate dehydrogenase gdh Rv3295 (family_assigned) — TetR/AcrR family transcriptional regulator Rv3295 acs (requalified) — acetate--CoA ligase acs gabT (requalified) — 4-aminobutyrate--2-oxoglutarate transaminase gabT ackA (requalified) — acetate kinase ackA fadB (requalified) — fatty oxidation protein FadB fadB adhE1 (family_assigned) — zinc-type alcohol dehydrogenase subunit E adhE1 Rv3167c (family_assigned) — TetR/AcrR family transcriptional regulator Rv3167c cobB (requalified) — NAD-dependent protein deacylase cobB mftR (family_assigned) — mycofactocin system transcriptional regulator mftR oxyS (family_assigned) — LysR family transcriptional regulator OxyS oxyS mbtG (requalified) — NADPH-dependent L-lysine N(6)-monooxygenase MbtG mbtG sigF (requalified) — RNA polymerase sigma factor SigF sigF rsbW (requalified) — anti-sigma B factor RsbW rsbW Rv2475c (family_assigned) — thioesterase family protein Rv2475c rocA (requalified) — L-glutamate gamma-semialdehyde dehydrogenase rocA garA (requalified) — glycogen accumulation regulator GarA garA aspC (requalified) — pyridoxal phosphate-dependent aminotransferase aspC gltD (family_assigned) — glutamate synthase subunit beta gltD glnA1 (requalified) — type I glutamate--ammonia ligase glnA1 lhr (requalified) — ATP-dependent helicase lhr nei (requalified) — endonuclease VIII Nei2 nei Rv3294c (family_assigned) — hypothetical protein Rv3294c Rv0210 (family_assigned) — hypothetical protein Rv0210 papA3 (requalified) — acyltransferase PapA3 papA3

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.