MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3291c · 46 genes shown · anchor lat · open gene page → · ← back to 1 hop

Evidence: Min score 0
lrpA (family_assigned) — transcriptional regulator LrpA lrpA lat (requalified) — L-lysine 6-transaminase lat Rv3292 (family_assigned) — VOC family protein Rv3292 Rv3167c (family_assigned) — TetR/AcrR family transcriptional regulator Rv3167c cobB (requalified) — NAD-dependent protein deacylase cobB mftR (family_assigned) — mycofactocin system transcriptional regulator mftR oxyS (family_assigned) — LysR family transcriptional regulator OxyS oxyS pcd (requalified) — piperideine-6-carboxylic acid dehydrogenase pcd parD1 (family_assigned) — type II toxin-antitoxin system ParD family antitox parD1 Rv1359 (family_assigned) — transcriptional regulator Rv1359 Rv3840 (family_assigned) — transcriptional regulator Rv3840 Rv0603 (family_assigned) — hypothetical protein Rv0603 nadR (requalified) — nicotinamide-nucleotide adenylyltransferase nadR Rv3289c (dark) — hypothetical protein Rv3289c usfY (family_assigned) — hypothetical protein usfY mbtG (requalified) — NADPH-dependent L-lysine N(6)-monooxygenase MbtG mbtG gdh (requalified) — NAD-glutamate dehydrogenase gdh Rv1167c (family_assigned) — TetR/AcrR family transcriptional regulator Rv1167c Rv3830c (family_assigned) — TetR/AcrR family transcriptional regulator Rv3830c Rv1931c (family_assigned) — transcriptional regulator Rv1931c Rv0494 (family_assigned) — HTH-type transcriptional regulator Rv0494 nadE (requalified) — NAD(+) synthase nadE Rv1152 (family_assigned) — GntR family transcriptional regulator Rv1152 pncA (requalified) — pyrazinamidase PncA pncA nadD (requalified) — nicotinate-nucleotide adenylyltransferase nadD sthA (requalified) — Si-specific NAD(P)(+) transhydrogenase sthA mftB (requalified) — mycofactocin biosynthesis chaperone MftB mftB mftC (requalified) — mycofactocin radical SAM maturase mftC Rv3183 (family_assigned) — XRE family transcriptional regulator Rv3183 Rv0690c (family_assigned) — DUF2332 domain-containing protein Rv0690c Rv0377 (family_assigned) — LysR family transcriptional regulator Rv0377 kdpE (requalified) — two-component system response regulator KdpE kdpE Rv2282c (family_assigned) — LysR family transcriptional regulator Rv2282c acs (requalified) — acetate--CoA ligase acs gabT (requalified) — 4-aminobutyrate--2-oxoglutarate transaminase gabT ackA (requalified) — acetate kinase ackA fadB (requalified) — fatty oxidation protein FadB fadB adhE1 (family_assigned) — zinc-type alcohol dehydrogenase subunit E adhE1 parE1 (family_assigned) — type II toxin-antitoxin system RelE/ParE family to parE1 vapC30 (requalified) — type II toxin-antitoxin system toxin ribonuclease vapC30 Rv3488 (family_assigned) — PadR family transcriptional regulator Rv3488 Rv1358 (family_assigned) — LuxR C-terminal-related transcriptional regulator Rv1358 cmr (family_assigned) — HTH-type transcriptional regulator Cmr cmr Rv0894 (family_assigned) — hypothetical protein Rv0894 Rv3263 (requalified) — class I SAM-dependent methyltransferase Rv3263 tcrA (family_assigned) — two component DNA binding transcriptional regulato tcrA

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.