MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3274c · 46 genes shown · anchor fixB · open gene page → · ← back to 1 hop

Evidence: Min score 0
fadE25 (requalified) — acyl-CoA dehydrogenase fadE25 fixB (family_assigned) — electron transfer flavoprotein subunit alpha/FixB fixB fixA (family_assigned) — electron transfer flavoprotein subunit beta/FixA f fixA purK (requalified) — 5-(carboxyamino)imidazole ribonucleotide synthase purK purE (requalified) — 5-(carboxyamino)imidazole ribonucleotide mutase purE fadB (requalified) — fatty oxidation protein FadB fadB Rv3224 (requalified) — NAD(P)-dependent oxidoreductase Rv3224 pra (family_assigned) — RDD family protein pra rpsI (requalified) — 30S ribosomal protein S9 rpsI nuoI (family_assigned) — NADH-quinone oxidoreductase subunit NuoI nuoI echA3 (family_assigned) — crotonase/enoyl-CoA hydratase family protein echA3 hadB (family_assigned) — (3R)-hydroxyacyl-ACP dehydratase subunit HadB hadB sucC (family_assigned) — ADP-forming succinate--CoA ligase subunit beta sucC fadH (requalified) — NADPH-dependent 2%2C4-dienoyl-CoA reductase fadH fadE19 (family_assigned) — acyl-CoA dehydrogenase family protein fadE19 fadE13 (family_assigned) — acyl-CoA dehydrogenase family protein fadE13 fadE20 (family_assigned) — acyl-CoA dehydrogenase family protein fadE20 fadE21 (family_assigned) — acyl-CoA dehydrogenase family protein fadE21 purM (requalified) — phosphoribosylformylglycinamidine cyclo-ligase purM purQ (family_assigned) — phosphoribosylformylglycinamidine synthase subunit purQ purL (family_assigned) — phosphoribosylformylglycinamidine synthase subunit purL purD (requalified) — phosphoribosylamine--glycine ligase purD purH (requalified) — bifunctional phosphoribosylaminoimidazolecarboxami purH purC (requalified) — phosphoribosylaminoimidazolesuccinocarboxamide syn purC purF (requalified) — amidophosphoribosyltransferase purF fadA (requalified) — acetyl-CoA C-acetyltransferase fadA fadA2 (requalified) — acetyl-CoA C-acetyltransferase fadA2 fadA4 (requalified) — acetyl-CoA acetyltransferase fadA4 fadA6 (requalified) — acetyl-CoA C-acetyltransferase fadA6 Rv1867 (requalified) — acetyl-CoA acetyltransferase Rv1867 ltp3 (family_assigned) — thiolase domain-containing protein ltp3 Rv3224B (family_assigned) — Conserved hypothetical protein Rv3224B Rv3224A (family_assigned) — Conserved hypothetical protein Rv3224A fas (requalified) — fatty acid synthase fas Rv0227c (family_assigned) — membrane protein Rv0227c sigH (family_assigned) — sigma-70 family RNA polymerase sigma factor SigH sigH metB (requalified) — cystathionine gamma-synthase metB glnA1 (requalified) — type I glutamate--ammonia ligase glnA1 cbs (requalified) — cystathionine beta-synthase cbs adk (requalified) — adenylate kinase adk rpsC (requalified) — 30S ribosomal protein S3 rpsC rplU (requalified) — 50S ribosomal protein L21 rplU rplI (requalified) — 50S ribosomal protein L9 rplI rpmD (requalified) — 50S ribosomal protein L30 rpmD rplD (requalified) — 50S ribosomal protein L4 rplD rplM (requalified) — 50S ribosomal protein L13 rplM

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.