MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3272 · 46 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv3272 (requalified) — CoA transferase Rv3272 Rv3273 (requalified) — transmembrane carbonic anhydrase Rv3273 Rv3271c (requalified) — cation transporter Rv3271c fadE7 (requalified) — acyl-CoA dehydrogenase fadE7 oxcA (requalified) — oxalyl-CoA decarboxylase oxcA pepD (requalified) — serine protease PepD pepD htrA (requalified) — serine protease HtrA htrA marP (requalified) — acid resistance serine protease MarP marP pepA (family_assigned) — S1C family serine protease pepA fadE16 (family_assigned) — acyl-CoA dehydrogenase family protein fadE16 Rv1043c (requalified) — serine protease Rv1043c Rv2499c (family_assigned) — MaoC family dehydratase Rv2499c mbtN (requalified) — acyl-ACP dehydrogenase MbtN mbtN canB (requalified) — beta-carbonic anhydrase CanB canB canA (requalified) — beta-carbonic anhydrase CanA canA pks12 (requalified) — type I polyketide synthase pks12 pks2 (requalified) — phthioceranic/hydroxyphthioceranic acid synthase pks2 mas (requalified) — mycocerosate synthase mas mdh (requalified) — malate dehydrogenase mdh Rv0648 (requalified) — alpha-mannosidase Rv0648 Rv2159c (family_assigned) — carboxymuconolactone decarboxylase family protein Rv2159c cmk (requalified) — (d)CMP kinase cmk ltp1 (requalified) — lipid-transfer protein ltp1 fadE13 (family_assigned) — acyl-CoA dehydrogenase family protein fadE13 fadB (requalified) — fatty oxidation protein FadB fadB fadE23 (family_assigned) — acyl-CoA dehydrogenase family protein fadE23 dlaT (requalified) — 2-oxoglutarate dehydrogenase%2C E2 component%2C di dlaT fadE1 (requalified) — acyl-CoA dehydrogenase FadE1 fadE1 ilvN (family_assigned) — acetolactate synthase small subunit ilvN fadD7 (family_assigned) — FadD7 family fatty acid--CoA ligase fadD7 ilvC (requalified) — ketol-acid reductoisomerase ilvC ilvD (requalified) — dihydroxy-acid dehydratase ilvD leuA (requalified) — 2-isopropylmalate synthase leuA moaB2 (family_assigned) — MogA/MoaB family molybdenum cofactor biosynthesis moaB2 mprB (requalified) — two-component system sensor histidine kinase MprB mprB mpa (requalified) — proteasome ATPase mpa htpX (requalified) — zinc metalloprotease HtpX htpX mprA (requalified) — two-component system response regulator MprA mprA sigB (family_assigned) — sigma-70 family RNA polymerase sigma factor SigB sigB tatB (requalified) — Sec-independent protein translocase protein TatB tatB rseA (requalified) — anti-sigma E factor RseA rseA glpK (requalified) — glycerol kinase GlpK glpK mec (requalified) — CysO-cysteine peptidase mec prcB (family_assigned) — proteasome subunit beta prcB Rv3672c (requalified) — CoA pyrophosphatase Rv3672c nth (requalified) — endonuclease III nth

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.