MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3268 · 46 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv3268 (family_assigned) — hypothetical protein Rv3268 lcp1 (requalified) — phosphotransferase Lcp1 lcp1 Rv1312 (family_assigned) — DUF2550 domain-containing protein Rv1312 rplF (requalified) — 50S ribosomal protein L6 rplF pks5 (requalified) — sulfolipid-1 biosynthesis phthioceranic/hydroxypht pks5 mas (requalified) — mycocerosate synthase mas pks2 (requalified) — phthioceranic/hydroxyphthioceranic acid synthase pks2 pks12 (requalified) — type I polyketide synthase pks12 ppsC (requalified) — phthiocerol type I polyketide synthase PpsC ppsC pks13 (requalified) — polyketide synthase Pks13 pks13 pks1 (requalified) — polyketide synthase pks1 Rv3807c (requalified) — decaprenylphosphoryl-5-phosphoribose phosphatase Rv3807c Rv3839 (requalified) — DUF2470 domain-containing protein Rv3839 manB (requalified) — D-alpha-D-mannose-1-phosphate guanylyltransferase manB wbbL1 (requalified) — N-acetylglucosaminyl-diphospho-decaprenol L-rhamno wbbL1 rmlD (requalified) — dTDP-4-dehydrorhamnose reductase rmlD steA (family_assigned) — putative cytokinetic ring protein SteA steA ctpC (requalified) — manganese-exporting P-type ATPase CtpC ctpC atpC (family_assigned) — F0F1 ATP synthase subunit epsilon atpC atpG (family_assigned) — F0F1 ATP synthase subunit gamma atpG atpA (family_assigned) — F0F1 ATP synthase subunit alpha atpA atpD (family_assigned) — F0F1 ATP synthase subunit beta atpD atpE (family_assigned) — F0F1 ATP synthase subunit C atpE rpsD (requalified) — 30S ribosomal protein S4 rpsD rplW (requalified) — 50S ribosomal protein L23 rplW rpsG (requalified) — 30S ribosomal protein S7 rpsG rplS (requalified) — 50S ribosomal protein L19 rplS rpsR1 (requalified) — 30S ribosomal protein S18 rpsR1 rplB (requalified) — 50S ribosomal protein L2 rplB fas (requalified) — fatty acid synthase fas fabD (requalified) — malonyl CoA-acyl carrier protein transacylase fabD mbtB (requalified) — phenyloxazoline synthase MbtB mbtB papA1 (requalified) — acyltransferase PapA1 papA1 ppsE (requalified) — phthiocerol type I polyketide synthase PpsE ppsE ppsD (requalified) — phthiocerol type I polyketide synthase PpsD ppsD ppsB (requalified) — phthiocerol type I polyketide synthase PpsB ppsB mbtH (requalified) — mycobactin NRPS accessory protein MbtH mbtH nrp (requalified) — non-ribosomal peptide synthetase Nrp nrp fadD32 (requalified) — long-chain-fatty-acid--AMP ligase FadD32 fadD32 accD4 (family_assigned) — acyl-CoA carboxylase subunit beta accD4 pks15 (requalified) — polyketide synthase pks15 mbtC (requalified) — polyketide synthetase MbtC mbtC ubiA (requalified) — decaprenyl-phosphate phosphoribosyltransferase ubiA aftB (requalified) — terminal beta-(1->2)-arabinofuranosyltransferase aftB glfT2 (requalified) — galactofuranosyl transferase GlfT2 glfT2 glf (requalified) — UDP-galactopyranose mutase glf

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.