MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3262 · 44 genes shown · anchor fbiA · open gene page → · ← back to 1 hop

Evidence: Min score 0
fbiB (requalified) — coenzyme F420-0:L-glutamate ligase fbiB fbiA (requalified) — 2-phospho-L-lactate transferase fbiA cofC (requalified) — 2-phospho-L-lactate guanylyltransferase cofC Rv3520c (requalified) — coenzyme F420-dependent oxidoreductase Rv3520c Rv3093c (requalified) — LLM class F420-dependent oxidoreductase Rv3093c Rv3300c (family_assigned) — RluA family pseudouridine synthase Rv3300c ddn (requalified) — deazaflavin-dependent nitroreductase Ddn ddn Rv2951c (requalified) — phthiodiolone/phenolphthiodiolone dimycocerosates Rv2951c fgd2 (requalified) — F420-dependent hydroxymycolic acid dehydrogenase fgd2 Rv1261c (requalified) — F420H(2)-dependent quinone reductase Rv1261c Rv3263 (requalified) — class I SAM-dependent methyltransferase Rv3263 Rv2893 (requalified) — LLM class F420-dependent oxidoreductase Rv2893 Rv0044c (requalified) — LLM class F420-dependent oxidoreductase Rv0044c fbiC (requalified) — bifunctional FO biosynthesis protein CofGH fbiC Rv3178 (requalified) — nitroreductase Rv3178 ppk1 (requalified) — RNA degradosome polyphosphate kinase ppk1 Rv0940c (family_assigned) — TIGR03619 family F420-dependent LLM class oxidored Rv0940c Rv3521 (family_assigned) — hypothetical protein Rv3521 ltp4 (family_assigned) — thiolase domain-containing protein ltp4 ltp3 (family_assigned) — thiolase domain-containing protein ltp3 Rv3094c (family_assigned) — acyl-CoA dehydrogenase family protein Rv3094c Rv3095 (family_assigned) — helix-turn-helix domain-containing protein Rv3095 atsB (requalified) — arylsulfatase AtsB atsB phoY1 (requalified) — phosphate signaling complex protein PhoU phoY1 rsfS (requalified) — ribosome silencing factor rsfS rplU (requalified) — 50S ribosomal protein L21 rplU rplQ (requalified) — 50S ribosomal protein L17 rplQ rplM (requalified) — 50S ribosomal protein L13 rplM fadA5 (requalified) — steroid 3-ketoacyl-CoA thiolase fadA5 fgd1 (requalified) — glucose-6-phosphate dehydrogenase (coenzyme-F420) fgd1 Rv2952 (requalified) — phthiotriol/phenolphthiotriol dimycocerosates meth Rv2952 Rv2953 (requalified) — trans-acting enoyl reductase Rv2953 Rv1262c (family_assigned) — HIT family protein Rv1262c iniR (family_assigned) — isoniazid response ATPase/transcriptional regulato iniR Rv1359 (family_assigned) — transcriptional regulator Rv1359 embR (requalified) — response regulator transcription factor EmbR embR Rv3840 (family_assigned) — transcriptional regulator Rv3840 Rv3736 (family_assigned) — AraC family transcriptional regulator Rv3736 mftR (family_assigned) — mycofactocin system transcriptional regulator mftR Rv3079c (requalified) — LLM class F420-dependent oxidoreductase Rv3079c Rv3072c (family_assigned) — hypothetical protein Rv3072c Rv0045c (family_assigned) — alpha/beta hydrolase Rv0045c ino1 (requalified) — inositol-3-phosphate synthase ino1 Rv0043c (family_assigned) — GntR family transcriptional regulator Rv0043c

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.