MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3260c · 46 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
whiB2 (family_assigned) — transcriptional regulator WhiB2 whiB2 Rv1830 (family_assigned) — HTH-type transcriptional regulator Rv1830 Rv2901c (dark) — DUF2469 domain-containing protein Rv2901c secG (family_assigned) — preprotein translocase subunit SecG secG rpoZ (family_assigned) — DNA-directed RNA polymerase subunit omega rpoZ Rv1321 (requalified) — endonuclease NucS Rv1321 clpS (requalified) — ATP-dependent Clp protease adapter ClpS clpS Rv3258c (dark) — hypothetical protein Rv3258c Rv3195 (requalified) — zinc-dependent metalloprotease Rv3195 helY (requalified) — RNA helicase helY Rv1025 (dark) — hypothetical protein Rv1025 Rv0525 (family_assigned) — histidine phosphatase family protein Rv0525 Rv2699c (dark) — DUF4193 domain-containing protein Rv2699c rbpA (family_assigned) — RNA polymerase-binding protein RbpA rbpA whiB1 (family_assigned) — transcriptional regulator WhiB1 whiB1 rnhB (requalified) — ribonuclease HII rnhB lepB (requalified) — signal peptidase I lepB rplS (requalified) — 50S ribosomal protein L19 rplS secE1 (requalified) — preprotein translocase SecE secE1 secY (family_assigned) — preprotein translocase subunit SecY secY yidC (requalified) — membrane protein insertase YidC yidC secA1 (family_assigned) — protein translocase subunit SecA secA1 secA2 (requalified) — accessory Sec system translocase SecA2 secA2 ftsY (requalified) — signal recognition particle-docking protein FtsY ftsY rpoA (family_assigned) — DNA-directed RNA polymerase subunit alpha rpoA rpoC (family_assigned) — DNA-directed RNA polymerase subunit beta' rpoC rpoB (family_assigned) — DNA-directed RNA polymerase subunit beta rpoB sigA (requalified) — RNA polymerase sigma factor sigA helZ (requalified) — DEAD/DEAH box helicase helZ Rv1322 (family_assigned) — hypothetical protein Rv1322 Rv1318c (family_assigned) — adenylate/guanylate cyclase domain-containing prot Rv1318c Rv1332 (family_assigned) — transcriptional regulator Rv1332 Rv1333 (family_assigned) — P1 family peptidase Rv1333 mec (requalified) — CysO-cysteine peptidase mec clpC1 (family_assigned) — ATP-dependent protease ATP-binding subunit ClpC clpC1 clpB (requalified) — chaperone protein ClpB clpB clpC2 (family_assigned) — ATP-dependent protease ATP-binding subunit ClpC clpC2 Rv3259 (family_assigned) — metallopeptidase family protein Rv3259 Rv3587c (family_assigned) — hypothetical protein Rv3587c fbpC (requalified) — diacylglycerol acyltransferase/mycolyltransferase fbpC Rv0007 (dark) — DUF3566 domain-containing protein Rv0007 Rv2256c (dark) — hypothetical protein Rv2256c Rv1024 (family_assigned) — septum formation initiator family protein Rv1024 Rv3194c (family_assigned) — PDZ domain-containing protein Rv3194c Rv3196 (family_assigned) — hypothetical protein Rv3196 clpP2 (family_assigned) — ATP-dependent CLP protease proteolytic subunit Clp clpP2

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.