MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3254 · 46 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv3254 (requalified) — oxidoreductase Rv3254 ptrp (family_assigned) — hypothetical protein ptrp iniR (family_assigned) — isoniazid response ATPase/transcriptional regulato iniR Rv2164c (family_assigned) — hypothetical protein Rv2164c erg3 (requalified) — membrane-bound C-5 sterol desaturase erg3 ureD (requalified) — urease accessory protein UreD ureD Rv3732 (dark) — DUF2330 domain-containing protein Rv3732 Rv3253c (requalified) — amino acid permease Rv3253c Rv2264c (family_assigned) — Hsp70 family protein Rv2264c mce3R (family_assigned) — TetR family transcriptional regulator Mce3R mce3R Rv2709 (dark) — DUF3099 domain-containing protein Rv2709 cyp139 (requalified) — cytochrome P450 cyp139 Rv3788 (family_assigned) — GreA/GreB family elongation factor Rv3788 Rv0539 (requalified) — dolichyl-phosphate sugar synthase Rv0539 Rv0540 (family_assigned) — DUF2064 domain-containing protein Rv0540 cpnT (requalified) — outer membrane channel protein/necrotizing toxin g cpnT Rv1775 (family_assigned) — hypothetical protein Rv1775 Rv3909 (dark) — hypothetical protein Rv3909 embR (requalified) — response regulator transcription factor EmbR embR Rv3263 (requalified) — class I SAM-dependent methyltransferase Rv3263 Rv1776c (family_assigned) — TetR/AcrR family transcriptional regulator Rv1776c moaR1 (family_assigned) — transcriptional regulator MoaR1 moaR1 Rv3736 (family_assigned) — AraC family transcriptional regulator Rv3736 pbpB (requalified) — D%2CD-transpeptidase PbpB pbpB ftsQ (requalified) — cell division protein FtsQ ftsQ rsmH (requalified) — 16S rRNA (cytosine(1402)-N(4))-methyltransferase R rsmH mraZ (requalified) — division/cell wall cluster transcriptional repress mraZ Rv3377c (requalified) — type B diterpene cyclase Rv3377c phyA (requalified) — presqualene diphosphate synthase HpnD phyA Rv1815 (family_assigned) — hypothetical protein Rv1815 Rv1364c (family_assigned) — sigma factor regulatory protein Rv1364c Rv1354c (requalified) — bifunctional diguanylate cyclase/phosphodiesterase Rv1354c Rv1937 (requalified) — FAD-binding oxidoreductase Rv1937 ureF (requalified) — urease accessory protein UreF ureF ureG (requalified) — urease accessory protein UreG ureG ureB (family_assigned) — urease subunit beta ureB ureA (family_assigned) — urease subunit gamma ureA ureC (family_assigned) — urease subunit alpha ureC Rv2113 (family_assigned) — integral membrane protein Rv2113 vapB47 (requalified) — antitoxin VapB47 vapB47 rubB (requalified) — rubredoxin RubB rubB glgE (requalified) — alpha-1,4-glucan:maltose-1-phosphate maltosyltrans glgE treS (requalified) — maltose alpha-D-glucosyltransferase treS aglA (family_assigned) — glycoside hydrolase family 13 protein aglA alkB (requalified) — alkane 1-monooxygenase alkB htpG (requalified) — molecular chaperone HtpG htpG

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.