MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3253c · 46 genes shown · anchor rubB · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv3253c (requalified) — amino acid permease Rv3253c rubB (requalified) — rubredoxin RubB rubB glgE (requalified) — alpha-1,4-glucan:maltose-1-phosphate maltosyltrans glgE treS (requalified) — maltose alpha-D-glucosyltransferase treS aglA (family_assigned) — glycoside hydrolase family 13 protein aglA Rv3254 (requalified) — oxidoreductase Rv3254 alkB (requalified) — alkane 1-monooxygenase alkB rubA (requalified) — rubredoxin rubA Rv3249c (family_assigned) — TetR family transcriptional regulator Rv3249c sahH (requalified) — adenosylhomocysteinase sahH Rv0178 (requalified) — Mce associated membrane protein Rv0178 Rv1363c (dark) — hypothetical protein Rv1363c omamB (requalified) — hypothetical protein omamB Rv1869c (requalified) — FAD-dependent oxidoreductase Rv1869c Rv0688 (requalified) — FAD/NAD(P)-binding oxidoreductase Rv0688 glgB (requalified) — 1%2C4-alpha-glucan branching protein GlgB glgB mak (requalified) — maltokinase mak glgA (requalified) — glycogen synthase glgA malQ (requalified) — 4-alpha-glucanotransferase malQ Rv3032 (requalified) — glycogen synthase Rv3032 Rv3031 (family_assigned) — glycoside hydrolase family 57 protein Rv3031 treY (requalified) — maltooligosyl trehalose synthase treY treX (requalified) — maltooligosyl trehalose synthase treX otsB1 (requalified) — trehalose-6-phosphate phosphatase OtsB otsB1 otsB2 (requalified) — trehalose-phosphatase otsB2 treZ (requalified) — malto-oligosyltrehalose trehalohydrolase treZ glbO (requalified) — group 2 truncated hemoglobin GlbO glbO bglS (requalified) — beta-glucosidase BglS bglS Rv2469c (requalified) — HNH endonuclease Rv2469c ptrp (family_assigned) — hypothetical protein ptrp iniR (family_assigned) — isoniazid response ATPase/transcriptional regulato iniR Rv2164c (family_assigned) — hypothetical protein Rv2164c erg3 (requalified) — membrane-bound C-5 sterol desaturase erg3 ureD (requalified) — urease accessory protein UreD ureD Rv3732 (dark) — DUF2330 domain-containing protein Rv3732 adhB (requalified) — alcohol dehydrogenase B adhB adhE1 (family_assigned) — zinc-type alcohol dehydrogenase subunit E adhE1 aldA (requalified) — aldehyde dehydrogenase aldA nirB (family_assigned) — nitrite reductase large subunit NirB nirB Rv0885 (requalified) — diiron oxygenase Rv0885 tmk (requalified) — dTMP kinase tmk metE (requalified) — 5-methyltetrahydropteroyltriglutamate--homocystein metE metH (requalified) — methionine synthase metH cbs (requalified) — cystathionine beta-synthase cbs metZ (requalified) — O-succinylhomoserine sulfhydrylase metZ metB (requalified) — cystathionine gamma-synthase metB

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.