MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3252c · 39 genes shown · anchor rubA · open gene page → · ← back to 1 hop

Evidence: Min score 0
alkB (requalified) — alkane 1-monooxygenase alkB rubA (requalified) — rubredoxin rubA Rv3249c (family_assigned) — TetR family transcriptional regulator Rv3249c rubB (requalified) — rubredoxin RubB rubB adhB (requalified) — alcohol dehydrogenase B adhB adhE1 (family_assigned) — zinc-type alcohol dehydrogenase subunit E adhE1 aldA (requalified) — aldehyde dehydrogenase aldA adh (requalified) — zinc-binding dehydrogenase adh Rv0147 (requalified) — aldehyde dehydrogenase Rv0147 adhA (family_assigned) — zinc-binding alcohol dehydrogenase family protein adhA Rv0223c (requalified) — aldehyde dehydrogenase Rv0223c pcd (requalified) — piperideine-6-carboxylic acid dehydrogenase pcd sahH (requalified) — adenosylhomocysteinase sahH Rv1869c (requalified) — FAD-dependent oxidoreductase Rv1869c Rv0688 (requalified) — FAD/NAD(P)-binding oxidoreductase Rv0688 nirB (family_assigned) — nitrite reductase large subunit NirB nirB Rv0885 (requalified) — diiron oxygenase Rv0885 tmk (requalified) — dTMP kinase tmk Rv3253c (requalified) — amino acid permease Rv3253c Rv0760c (family_assigned) — ketosteroid isomerase family protein Rv0760c Rv0458 (family_assigned) — aldehyde dehydrogenase family protein Rv0458 dhaA (requalified) — haloalkane dehalogenase dhaA Rv0765c (family_assigned) — SDR family oxidoreductase Rv0765c Rv0770 (requalified) — NAD(P)-dependent oxidoreductase Rv0770 cyp123 (requalified) — cytochrome P450 cyp123 acs (requalified) — acetate--CoA ligase acs cyp51 (requalified) — lanosterol 14-alpha demethylase cyp51 aofH (family_assigned) — flavin monoamine oxidase family protein aofH gabT (requalified) — 4-aminobutyrate--2-oxoglutarate transaminase gabT mmsA (requalified) — CoA-acylating methylmalonate-semialdehyde dehydrog mmsA fadB (requalified) — fatty oxidation protein FadB fadB ackA (requalified) — acetate kinase ackA Rv3292 (family_assigned) — VOC family protein Rv3292 metE (requalified) — 5-methyltetrahydropteroyltriglutamate--homocystein metE metH (requalified) — methionine synthase metH cbs (requalified) — cystathionine beta-synthase cbs metZ (requalified) — O-succinylhomoserine sulfhydrylase metZ metB (requalified) — cystathionine gamma-synthase metB mtn (requalified) — 5'-methylthioadenosine/adenosylhomocysteine nucleo mtn

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.