MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3240c · 46 genes shown · anchor secY · open gene page → · ← back to 1 hop

Evidence: Min score 0
secA1 (family_assigned) — protein translocase subunit SecA secA1 secY (family_assigned) — preprotein translocase subunit SecY secY secG (family_assigned) — preprotein translocase subunit SecG secG secE1 (requalified) — preprotein translocase SecE secE1 yidC (requalified) — membrane protein insertase YidC yidC secA2 (requalified) — accessory Sec system translocase SecA2 secA2 yajC (family_assigned) — preprotein translocase subunit YajC yajC ffh (requalified) — signal recognition particle protein ffh ftsY (requalified) — signal recognition particle-docking protein FtsY ftsY raiA (requalified) — ribosome-associated translation inhibitor RaiA raiA rplT (requalified) — 50S ribosomal protein L20 rplT polA (requalified) — DNA polymerase I polA Rv3237c (family_assigned) — cation:proton antiporter regulatory subunit Rv3237c rplR (requalified) — 50S ribosomal protein L18 rplR rplE (requalified) — 50S ribosomal protein L5 rplE rpsC (requalified) — 30S ribosomal protein S3 rpsC rplF (requalified) — 50S ribosomal protein L6 rplF rplV (requalified) — 50S ribosomal protein L22 rplV nusG (requalified) — transcription termination/antitermination protein nusG rplK (requalified) — 50S ribosomal protein L11 rplK rplA (requalified) — 50S ribosomal protein L1 rplA rnpA (requalified) — ribonuclease P protein component rnpA yidD (requalified) — membrane protein insertion efficiency factor YidD yidD Rv3920c (family_assigned) — R3H domain-containing nucleic acid-binding protein Rv3920c secD (family_assigned) — protein translocase subunit SecD secD rplD (requalified) — 50S ribosomal protein L4 rplD Rv3362c (family_assigned) — ATP/GTP-binding protein Rv3362c rplW (requalified) — 50S ribosomal protein L23 rplW rpsF (requalified) — 30S ribosomal protein S6 rpsF rpsI (requalified) — 30S ribosomal protein S9 rpsI rpsO (requalified) — 30S ribosomal protein S15 rpsO rpsE (requalified) — 30S ribosomal protein S5 rpsE rpsS (requalified) — 30S ribosomal protein S19 rpsS rpmC (requalified) — 50S ribosomal protein L29 rpmC rplX (requalified) — 50S ribosomal protein L24 rplX rpsQ (requalified) — 30S ribosomal protein S17 rpsQ rpsT (requalified) — 30S ribosomal protein S20 rpsT rpmJ (requalified) — 50S ribosomal protein L36 rpmJ dnaN (family_assigned) — DNA polymerase III subunit beta dnaN lppK (family_assigned) — hypothetical protein lppK recA (requalified) — intein-containing recombinase RecA recA Rv1277 (family_assigned) — hypothetical protein Rv1277 Rv2529 (family_assigned) — hypothetical protein Rv2529 Rv1278 (family_assigned) — AAA family ATPase Rv1278 Rv3236c (requalified) — integral membrane transport protein Rv3236c Rv3238c (family_assigned) — isoprenylcysteine carboxylmethyltransferase family Rv3238c

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.