MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3238c · 29 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv3238c (family_assigned) — isoprenylcysteine carboxylmethyltransferase family Rv3238c sahH (requalified) — adenosylhomocysteinase sahH sseA (requalified) — sulfurtransferase sseA mmuM (requalified) — homocysteine S-methyltransferase mmuM cysA2 (requalified) — sulfurtransferase cysA2 sseB (requalified) — sulfurtransferase sseB metH (requalified) — methionine synthase metH cbs (requalified) — cystathionine beta-synthase cbs metC (requalified) — bifunctional o-acetylhomoserine/o-acetylserine sul metC Rv2294 (family_assigned) — MalY/PatB family protein Rv2294 Rv0075 (family_assigned) — MalY/PatB family protein Rv0075 metZ (requalified) — O-succinylhomoserine sulfhydrylase metZ metB (requalified) — cystathionine gamma-synthase metB metE (requalified) — 5-methyltetrahydropteroyltriglutamate--homocystein metE mtn (requalified) — 5'-methylthioadenosine/adenosylhomocysteine nucleo mtn Rv3284 (family_assigned) — SufE family protein Rv3284 iscS (family_assigned) — cysteine desulfurase family protein iscS sirA (requalified) — sulfite reductase sirA cysH (requalified) — phosphoadenylyl-sulfate reductase cysH metK (requalified) — S-adenosylmethionine synthetase metK Rv2172c (requalified) — mycobacterial-type methylenetetrahydrofolate reduc Rv2172c cysE (requalified) — serine O-acetyltransferase cysE glyA1 (requalified) — serine hydroxymethyltransferase glyA1 glyA2 (requalified) — serine hydroxymethyltransferase glyA2 metA (requalified) — homoserine O-acetyltransferase metA Rv3342 (requalified) — class I SAM-dependent methyltransferase Rv3342 Rv0074 (family_assigned) — amidohydrolase family protein Rv0074 cysK1 (requalified) — O-acetylserine sulfhydrylase cysK1 Rv3684 (requalified) — lyase Rv3684

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.