MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3232c · 46 genes shown · anchor ppk1 · open gene page → · ← back to 1 hop

Evidence: Min score 0
ppk2 (requalified) — polyphosphate kinase ppk2 ppk1 (requalified) — RNA degradosome polyphosphate kinase ppk1 ppa (requalified) — inorganic diphosphatase ppa Rv3231c (family_assigned) — hypothetical protein Rv3231c tgs3 (requalified) — diacyglycerol O-acyltransferase tgs3 Rv3233c (family_assigned) — Possible triacylglycerol synthase (diacylglycerol Rv3233c Rv0213c (requalified) — methyltransferase Rv0213c Rv3230c (requalified) — NADPH oxidoreductase Rv3230c hemN (requalified) — oxygen-independent coproporphyrinogen III oxidase hemN Rv3235 (dark) — hypothetical protein Rv3235 Rv1276c (family_assigned) — hypothetical protein Rv1276c pta (requalified) — phosphate acetyltransferase pta desA3 (requalified) — stearoyl-CoA 9-desaturase desA3 mutT1 (requalified) — NUDIX hydrolase mutT1 mshD (requalified) — mycothiol synthase mshD Rv0496 (family_assigned) — hypothetical protein Rv0496 ppx2 (requalified) — exopolyphosphatase Ppx2 ppx2 atpH (family_assigned) — F0F1 ATP synthase subunit B/delta atpH atpF (family_assigned) — F0F1 ATP synthase subunit B atpF atpE (family_assigned) — F0F1 ATP synthase subunit C atpE atpG (family_assigned) — F0F1 ATP synthase subunit gamma atpG atpA (family_assigned) — F0F1 ATP synthase subunit alpha atpA atpD (family_assigned) — F0F1 ATP synthase subunit beta atpD Rv2170 (requalified) — N-acetyltransferase Rv2170 Rv0948c (requalified) — chorismate mutase Rv0948c Rv2252 (requalified) — diacylglycerol kinase Rv2252 lipY (requalified) — triacylglycerol lipase Lip lipY Rv3371 (requalified) — diacylglycerol O-acyltransferase Rv3371 Rv0221 (family_assigned) — wax ester/triacylglycerol synthase family O-acyltr Rv0221 Rv3087 (family_assigned) — wax ester/triacylglycerol synthase family O-acyltr Rv3087 tgs4 (family_assigned) — wax ester/triacylglycerol synthase family O-acyltr tgs4 Rv2285 (family_assigned) — wax ester/triacylglycerol synthase family O-acyltr Rv2285 nadR (requalified) — nicotinamide-nucleotide adenylyltransferase nadR fadD4 (requalified) — fatty-acid--CoA ligase FadD4 fadD4 Rv3729 (requalified) — transferase Rv3729 Rv2954c (requalified) — [2%2C4-di-O-methyl-alpha-L-fucopyranosyl-(1->3)-al Rv2954c desA1 (requalified) — acyl-ACP desaturase DesA desA1 desA2 (requalified) — acyl-ACP desaturase desA2 Rv1465 (family_assigned) — SUF system NifU family Fe-S cluster assembly prote Rv1465 iscS (family_assigned) — cysteine desulfurase family protein iscS fadH (requalified) — NADPH-dependent 2%2C4-dienoyl-CoA reductase fadH rpfD (requalified) — resuscitation-promoting factor protein RpfD rpfD Rv2390c (family_assigned) — hypothetical protein Rv2390c Rv2879c (family_assigned) — Conserved hypothetical protein Rv2879c hemE (requalified) — uroporphyrinogen decarboxylase hemE gltB (family_assigned) — glutamate synthase large subunit gltB

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.