MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3228 · 46 genes shown · anchor aroA · open gene page → · ← back to 1 hop

Evidence: Min score 0
rsgA (family_assigned) — ribosome small subunit-dependent GTPase A rsgA aroA (requalified) — 3-phosphoshikimate 1-carboxyvinyltransferase aroA thiL (requalified) — thiamine-phosphate kinase thiL thiE (requalified) — thiamine phosphate synthase thiE adk (requalified) — adenylate kinase adk rpsL (requalified) — 30S ribosomal protein S12 rpsL rpsI (requalified) — 30S ribosomal protein S9 rpsI rpsO (requalified) — 30S ribosomal protein S15 rpsO rpsQ (requalified) — 30S ribosomal protein S17 rpsQ rpsT (requalified) — 30S ribosomal protein S20 rpsT rpsH (requalified) — 30S ribosomal protein S8 rpsH rpsD (requalified) — 30S ribosomal protein S4 rpsD rpsG (requalified) — 30S ribosomal protein S7 rpsG aroF (requalified) — chorismate synthase aroF aroE (requalified) — shikimate dehydrogenase aroE aroB (requalified) — 3-dehydroquinate synthase aroB aroK (requalified) — shikimate kinase AroK aroK cmk (requalified) — (d)CMP kinase cmk tnpB (family_assigned) — IS607 family element RNA-guided endonuclease TnpB tnpB Rv2979c (family_assigned) — IS607 family transposase Rv2979c radA (requalified) — DNA repair protein RadA radA thiD (requalified) — hydroxymethylpyrimidine/phosphomethylpyrimidine ki thiD thiG (requalified) — thiazole synthase thiG thiS (requalified) — sulfur carrier protein ThiS thiS thiC (requalified) — phosphomethylpyrimidine synthase ThiC thiC secY (family_assigned) — preprotein translocase subunit SecY secY mapA (requalified) — methionine aminopeptidase mapA rpsK (requalified) — 30S ribosomal protein S11 rpsK atpH (family_assigned) — F0F1 ATP synthase subunit B/delta atpH purB (requalified) — adenylosuccinate lyase purB apt (requalified) — adenine phosphoribosyltransferase apt rpsN1 (requalified) — 30S ribosomal protein S14 rpsN1 rplT (requalified) — 50S ribosomal protein L20 rplT rpsJ (requalified) — 30S ribosomal protein S10 rpsJ rplV (requalified) — 50S ribosomal protein L22 rplV rpsC (requalified) — 30S ribosomal protein S3 rpsC rplU (requalified) — 50S ribosomal protein L21 rplU rplI (requalified) — 50S ribosomal protein L9 rplI rpmD (requalified) — 50S ribosomal protein L30 rpmD rplD (requalified) — 50S ribosomal protein L4 rplD rplM (requalified) — 50S ribosomal protein L13 rplM rplR (requalified) — 50S ribosomal protein L18 rplR rpmA (requalified) — 50S ribosomal protein L27 rpmA rpmE (requalified) — 50S ribosomal protein L31 rpmE rplY (requalified) — 50S ribosomal protein L25/general stress protein C rplY rpmG2 (requalified) — 50S ribosomal protein L33 rpmG2

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.