MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3225c · 46 genes shown · anchor pks1 · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv3225c (family_assigned) — bifunctional GNAT family N-acetyltransferase/amino Rv3225c pks1 (requalified) — polyketide synthase pks1 mas (requalified) — mycocerosate synthase mas pks12 (requalified) — type I polyketide synthase pks12 ppsC (requalified) — phthiocerol type I polyketide synthase PpsC ppsC pks5 (requalified) — sulfolipid-1 biosynthesis phthioceranic/hydroxypht pks5 pks2 (requalified) — phthioceranic/hydroxyphthioceranic acid synthase pks2 rnc (requalified) — ribonuclease III rnc gcvB (requalified) — aminomethyl-transferring glycine dehydrogenase gcvB Rv2636 (family_assigned) — chloramphenicol phosphotransferase CPT family prot Rv2636 Rv3226c (requalified) — SOS response-associated peptidase Rv3226c mbtG (requalified) — NADPH-dependent L-lysine N(6)-monooxygenase MbtG mbtG Rv0802c (family_assigned) — GNAT family protein Rv0802c fas (requalified) — fatty acid synthase fas pks15 (requalified) — polyketide synthase pks15 mbtC (requalified) — polyketide synthetase MbtC mbtC mbtB (requalified) — phenyloxazoline synthase MbtB mbtB fabD (requalified) — malonyl CoA-acyl carrier protein transacylase fabD ppsE (requalified) — phthiocerol type I polyketide synthase PpsE ppsE ppsD (requalified) — phthiocerol type I polyketide synthase PpsD ppsD ppsB (requalified) — phthiocerol type I polyketide synthase PpsB ppsB papA1 (requalified) — acyltransferase PapA1 papA1 rpmA (requalified) — 50S ribosomal protein L27 rpmA rpmF (requalified) — 50S ribosomal protein L32 rpmF rpsI (requalified) — 30S ribosomal protein S9 rpsI rplP (requalified) — 50S ribosomal protein L16 rplP Rv2926c (family_assigned) — hypothetical protein Rv2926c rplS (requalified) — 50S ribosomal protein L19 rplS gcvH (requalified) — glycine cleavage system protein GcvH gcvH gcvT (requalified) — aminomethyltransferase gcvT glyA1 (requalified) — serine hydroxymethyltransferase glyA1 glyA2 (requalified) — serine hydroxymethyltransferase glyA2 Rv1248c (family_assigned) — multifunctional oxoglutarate decarboxylase/oxoglut Rv1248c purD (requalified) — phosphoribosylamine--glycine ligase purD Rv2635 (requalified) — hypothetical protein Rv2635 Rv0330c (family_assigned) — helix-turn-helix domain-containing protein Rv0330c Rv0842 (requalified) — MFS transporter Rv0842 PE_PGRS43 (family_assigned) — PE-PGRS family protein PE_PGRS43 PE_PGRS43 PPE8 (family_assigned) — PPE family protein PPE8 PPE8 tyzC (requalified) — hypothetical protein tyzC aroA (requalified) — 3-phosphoshikimate 1-carboxyvinyltransferase aroA rsgA (family_assigned) — ribosome small subunit-dependent GTPase A rsgA xerC (requalified) — tyrosine recombinase XerC xerC rfbE (family_assigned) — ABC transporter ATP-binding protein rfbE Rv3242c (family_assigned) — ComF family protein Rv3242c mbtH (requalified) — mycobactin NRPS accessory protein MbtH mbtH

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.