MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3224B · 46 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv3224B (family_assigned) — Conserved hypothetical protein Rv3224B Rv3224 (requalified) — NAD(P)-dependent oxidoreductase Rv3224 Rv3224A (family_assigned) — Conserved hypothetical protein Rv3224A rshA (requalified) — anti-sigma factor RshA rshA sigH (family_assigned) — sigma-70 family RNA polymerase sigma factor SigH sigH Rv3222c (family_assigned) — hypothetical protein Rv3222c aspS (requalified) — aspartate--tRNA ligase aspS metS (requalified) — methionine--tRNA ligase metS lysX (requalified) — bifunctional lysine--tRNA ligase/phosphatidylglyce lysX thrS (requalified) — threonine--tRNA ligase thrS lysS (requalified) — lysine--tRNA ligase lysS tyrS (requalified) — tyrosine--tRNA ligase tyrS mesJ (requalified) — tRNA lysidine(34) synthetase TilS mesJ fas (requalified) — fatty acid synthase fas fadE25 (requalified) — acyl-CoA dehydrogenase fadE25 Rv0227c (family_assigned) — membrane protein Rv0227c TB7.3 (requalified) — biotin/lipoyl-binding carrier protein TB7.3 moeB1 (requalified) — adenylyltransferase/sulfurtransferase MoeZ moeB1 rpoB (family_assigned) — DNA-directed RNA polymerase subunit beta rpoB rpoC (family_assigned) — DNA-directed RNA polymerase subunit beta' rpoC rpoA (family_assigned) — DNA-directed RNA polymerase subunit alpha rpoA rpoZ (family_assigned) — DNA-directed RNA polymerase subunit omega rpoZ Rv3220c (family_assigned) — histidine kinase N-terminal domain-containing prot Rv3220c gatB (family_assigned) — Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subun gatB gatC (family_assigned) — Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subun gatC Rv2571c (family_assigned) — aromatic acid exporter family protein Rv2571c hisS (requalified) — histidine--tRNA ligase hisS alaS (requalified) — alanine--tRNA ligase alaS guaA (requalified) — glutamine-hydrolyzing GMP synthase guaA gltS (requalified) — glutamate--tRNA ligase gltS leuS (requalified) — leucine--tRNA ligase leuS tatD (requalified) — deoxyribonuclease TatD tatD argS (requalified) — arginine--tRNA ligase argS ileS (requalified) — isoleucine--tRNA ligase ileS metH (requalified) — methionine synthase metH infB (requalified) — translation initiation factor IF-2 infB rplO (requalified) — 50S ribosomal protein L15 rplO rpsO (requalified) — 30S ribosomal protein S15 rpsO Rv2613c (requalified) — ATP adenylyltransferase Rv2613c rpmF (requalified) — 50S ribosomal protein L32 rpmF rplC (requalified) — 50S ribosomal protein L3 rplC pheT (family_assigned) — phenylalanine--tRNA ligase subunit beta pheT mpg (requalified) — DNA-3-methyladenine glycosylase mpg tsf (requalified) — translation elongation factor Ts tsf prfA (requalified) — peptide chain release factor 1 prfA hpt (requalified) — hypoxanthine phosphoribosyltransferase hpt

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.