MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3224 · 46 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv3224 (requalified) — NAD(P)-dependent oxidoreductase Rv3224 Rv3224B (family_assigned) — Conserved hypothetical protein Rv3224B Rv3224A (family_assigned) — Conserved hypothetical protein Rv3224A fas (requalified) — fatty acid synthase fas fadE25 (requalified) — acyl-CoA dehydrogenase fadE25 Rv0227c (family_assigned) — membrane protein Rv0227c sigH (family_assigned) — sigma-70 family RNA polymerase sigma factor SigH sigH rshA (requalified) — anti-sigma factor RshA rshA echA21 (family_assigned) — crotonase/enoyl-CoA hydratase family protein echA21 ettA (requalified) — energy-dependent translational throttle protein Et ettA fum (requalified) — class II fumarate hydratase fum TB7.3 (requalified) — biotin/lipoyl-binding carrier protein TB7.3 gap (requalified) — type I glyceraldehyde-3-phosphate dehydrogenase gap Rv3222c (family_assigned) — hypothetical protein Rv3222c aspS (requalified) — aspartate--tRNA ligase aspS pks7 (requalified) — type I polyketide synthase pks7 pks17 (requalified) — polyketide synthase pks17 pks2 (requalified) — phthioceranic/hydroxyphthioceranic acid synthase pks2 mas (requalified) — mycocerosate synthase mas accD3 (family_assigned) — carboxyl transferase domain-containing protein accD3 pks6 (requalified) — membrane bound polyketide synthase pks6 fixB (family_assigned) — electron transfer flavoprotein subunit alpha/FixB fixB fixA (family_assigned) — electron transfer flavoprotein subunit beta/FixA f fixA purK (requalified) — 5-(carboxyamino)imidazole ribonucleotide synthase purK purE (requalified) — 5-(carboxyamino)imidazole ribonucleotide mutase purE fadB (requalified) — fatty oxidation protein FadB fadB mmpA (requalified) — hypothetical protein mmpA Rv0479c (family_assigned) — DUF2993 domain-containing protein Rv0479c Rv1476 (family_assigned) — DUF6676 family protein Rv1476 Rv3668c (requalified) — protease Rv3668c lprC (family_assigned) — DUF3558 domain-containing protein lprC Rv0228 (requalified) — acyltransferase Rv0228 rpoB (family_assigned) — DNA-directed RNA polymerase subunit beta rpoB rpoC (family_assigned) — DNA-directed RNA polymerase subunit beta' rpoC rpoA (family_assigned) — DNA-directed RNA polymerase subunit alpha rpoA rpoZ (family_assigned) — DNA-directed RNA polymerase subunit omega rpoZ moeB1 (requalified) — adenylyltransferase/sulfurtransferase MoeZ moeB1 lipE (requalified) — lipase LipE lipE fadB2 (requalified) — 3-hydroxybutyryl-CoA dehydrogenase FadB2 fadB2 fadE2 (requalified) — acyl-CoA dehydrogenase fadE2 fadE7 (requalified) — acyl-CoA dehydrogenase fadE7 fadE23 (family_assigned) — acyl-CoA dehydrogenase family protein fadE23 fadE4 (family_assigned) — acyl-CoA dehydrogenase family protein fadE4 rplU (requalified) — 50S ribosomal protein L21 rplU rplM (requalified) — 50S ribosomal protein L13 rplM rpsO (requalified) — 30S ribosomal protein S15 rpsO

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.