MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3210c · 46 genes shown · anchor rsbW · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv3210c (family_assigned) — ferritin-like fold-containing protein Rv3210c Rv3212 (family_assigned) — hypothetical protein Rv3212 Rv0487 (family_assigned) — YbjN domain-containing protein Rv0487 rsbW (requalified) — anti-sigma B factor RsbW rsbW Rv3679 (family_assigned) — ArsA family ATPase Rv3679 rhlE (requalified) — DEAD/DEAH box helicase rhlE bpa (requalified) — proteasome activator protein Bpa bpa Rv3118 (family_assigned) — hypothetical protein Rv3118 Rv0814c (family_assigned) — DUF1416 domain-containing protein Rv0814c Rv3205c (family_assigned) — hypothetical protein Rv3205c lppL (family_assigned) — hypothetical protein lppL Rv0556 (family_assigned) — DUF3592 domain-containing protein Rv0556 Rv2446c (dark) — DUF4233 domain-containing protein Rv2446c Rv3438 (family_assigned) — alpha/beta hydrolase Rv3438 mshA (requalified) — D-inositol-3-phosphate glycosyltransferase mshA fadE5 (requalified) — acyl-CoA dehydrogenase fadE5 Rv3662c (requalified) — oxidoreductase Rv3662c fadE15 (requalified) — acyl-CoA dehydrogenase fadE15 TB16.3 (family_assigned) — SRPBCC family protein TB16.3 sigF (requalified) — RNA polymerase sigma factor SigF sigF Rv1364c (family_assigned) — sigma factor regulatory protein Rv1364c rsfA (requalified) — anti-sigma-F factor antagonist RsfA rsfA Rv1904 (requalified) — anti-sigma factor antagonist Rv1904 rsfB (family_assigned) — STAS domain-containing protein rsfB usfY (family_assigned) — hypothetical protein usfY Rv3680 (family_assigned) — ArsA family ATPase Rv3680 Rv3678A (family_assigned) — hypothetical protein Rv3678A Rv3678c (family_assigned) — RidA family protein Rv3678c Rv3677c (requalified) — MBL fold metallo-hydrolase Rv3677c gpsI (requalified) — polyribonucleotide nucleotidyltransferase gpsI Rv3433c (requalified) — NAD(P)H-hydrate dehydratase Rv3433c rplD (requalified) — 50S ribosomal protein L4 rplD rplM (requalified) — 50S ribosomal protein L13 rplM rplC (requalified) — 50S ribosomal protein L3 rplC prcA (family_assigned) — proteasome subunit alpha prcA mpa (requalified) — proteasome ATPase mpa prcB (family_assigned) — proteasome subunit beta prcB rfbE (family_assigned) — ABC transporter ATP-binding protein rfbE glfT1 (requalified) — galactofuranosyl transferase GlfT glfT1 rfbD (family_assigned) — ABC transporter permease rfbD cysA3 (requalified) — thiosulfate sulfurtransferase cysA3 cysA2 (requalified) — sulfurtransferase cysA2 Rv2844 (family_assigned) — ferritin-like domain-containing protein Rv2844 moaE1 (family_assigned) — molybdopterin synthase catalytic subunit 1 moaE1 Rv3120 (requalified) — class I SAM-dependent methyltransferase Rv3120 Rv2468c (requalified) — hypothetical protein Rv2468c

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.