MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3209 · 39 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv3209 (family_assigned) — MmpS family transport accessory protein Rv3209 Rv3717 (family_assigned) — hypothetical protein Rv3717 ftsW (family_assigned) — putative lipid II flippase FtsW ftsW Rv3096 (requalified) — 1%2C4-beta-xylanase Rv3096 xerC (requalified) — tyrosine recombinase XerC xerC Rv0063 (requalified) — FAD-binding oxidoreductase Rv0063 TB9.4 (family_assigned) — hypothetical protein TB9.4 lcp1 (requalified) — phosphotransferase Lcp1 lcp1 Rv3915 (requalified) — peptidoglycan hydrolase Rv3915 Rv3716c (family_assigned) — YbaB/EbfC family nucleoid-associated protein Rv3716c recR (requalified) — recombination mediator RecR recR murG (requalified) — undecaprenyldiphospho-muramoylpentapeptide beta-N- murG murC (requalified) — UDP-N-acetylmuramate--L-alanine ligase murC ftsQ (requalified) — cell division protein FtsQ ftsQ murF (requalified) — UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanin murF murX (requalified) — phospho-N-acetylmuramoyl-pentapeptide-transferase murX murD (requalified) — UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase murD Rv3095 (family_assigned) — helix-turn-helix domain-containing protein Rv3095 Rv3094c (family_assigned) — acyl-CoA dehydrogenase family protein Rv3094c Rv2120c (family_assigned) — glycine zipper 2TM domain-containing protein Rv2120c Rv3242c (family_assigned) — ComF family protein Rv3242c apt (requalified) — adenine phosphoribosyltransferase apt Rv2646 (requalified) — tyrosine-type recombinase/integrase Rv2646 viuB (requalified) — siderophore-interacting protein viuB tyrA (requalified) — prephenate dehydrogenase TyrA tyrA whiA (family_assigned) — DNA-binding protein WhiA whiA hsr1 (requalified) — hypothetical protein hsr1 sigD (requalified) — ECF RNA polymerase sigma factor SigD sigD qcrC (requalified) — cytochrome c qcrC Rv2199c (family_assigned) — cytochrome c oxidase subunit 4 Rv2199c qcrA (requalified) — hypothetical protein qcrA Rv2169c (dark) — DUF3040 domain-containing protein Rv2169c Rv2698 (dark) — DUF3093 domain-containing protein Rv2698 Rv3268 (family_assigned) — hypothetical protein Rv3268 manB (requalified) — D-alpha-D-mannose-1-phosphate guanylyltransferase manB wbbL1 (requalified) — N-acetylglucosaminyl-diphospho-decaprenol L-rhamno wbbL1 rmlD (requalified) — dTDP-4-dehydrorhamnose reductase rmlD steA (family_assigned) — putative cytokinetic ring protein SteA steA ctpC (requalified) — manganese-exporting P-type ATPase CtpC ctpC

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.