MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3208A · 46 genes shown · anchor qcrC · open gene page → · ← back to 1 hop

Evidence: Min score 0
TB9.4 (family_assigned) — hypothetical protein TB9.4 qcrC (requalified) — cytochrome c qcrC Rv3209 (family_assigned) — MmpS family transport accessory protein Rv3209 Rv2199c (family_assigned) — cytochrome c oxidase subunit 4 Rv2199c qcrA (requalified) — hypothetical protein qcrA Rv2169c (dark) — DUF3040 domain-containing protein Rv2169c Rv2698 (dark) — DUF3093 domain-containing protein Rv2698 qcrB (family_assigned) — cytochrome bc complex cytochrome b subunit qcrB Rv3013 (family_assigned) — amino acid-binding protein Rv3013 Rv1828 (family_assigned) — MerR family transcriptional regulator Rv1828 Rv0528 (requalified) — cytochrome c biogenesis protein ResB Rv0528 Rv0004 (requalified) — DNA replication protein DciA Rv0004 Rv2680 (dark) — DUF3000 domain-containing protein Rv2680 ctaC (family_assigned) — cytochrome c oxidase subunit II ctaC ctaD (family_assigned) — cytochrome c oxidase subunit I ctaD ctaE (family_assigned) — heme-copper oxidase subunit III ctaE Rv3717 (family_assigned) — hypothetical protein Rv3717 ftsW (family_assigned) — putative lipid II flippase FtsW ftsW Rv3096 (requalified) — 1%2C4-beta-xylanase Rv3096 xerC (requalified) — tyrosine recombinase XerC xerC Rv0063 (requalified) — FAD-binding oxidoreductase Rv0063 Rv2170 (requalified) — N-acetyltransferase Rv2170 Rv2146c (family_assigned) — YggT family protein Rv2146c Rv2256c (dark) — hypothetical protein Rv2256c Rv2696c (dark) — DUF3710 domain-containing protein Rv2696c dut (requalified) — deoxyuridine 5'-triphosphate nucleotidohydrolase dut Rv2235 (family_assigned) — SURF1 family protein Rv2235 eccB4 (family_assigned) — type VII secretion system ESX-4 subunit EccB4 eccB4 eccD4 (family_assigned) — type VII secretion system ESX-4 subunit EccD4 eccD4 Rv0948c (requalified) — chorismate mutase Rv0948c rpsD (requalified) — 30S ribosomal protein S4 rpsD rplB (requalified) — 50S ribosomal protein L2 rplB rpmE (requalified) — 50S ribosomal protein L31 rpmE rpsO (requalified) — 30S ribosomal protein S15 rpsO rplO (requalified) — 50S ribosomal protein L15 rplO rpsE (requalified) — 30S ribosomal protein S5 rpsE garA (requalified) — glycogen accumulation regulator GarA garA Rv1332 (family_assigned) — transcriptional regulator Rv1332 Rv1829 (family_assigned) — hypothetical protein Rv1829 gcvH (requalified) — glycine cleavage system protein GcvH gcvH Rv1824 (family_assigned) — small basic family protein Rv1824 Rv1823 (family_assigned) — DUF881 domain-containing protein Rv1823 ccsA (requalified) — c-type cytochrome biogenesis protein CcsB ccsA ccdA (requalified) — cytochrome C-type biogenesis protein CcdA ccdA Rv0526 (requalified) — thioredoxin Rv0526 Rv0525 (family_assigned) — histidine phosphatase family protein Rv0525

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.