MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3208 · 46 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv3208 (family_assigned) — TetR/AcrR family transcriptional regulator Rv3208 narL (requalified) — two-component system response regulator NarL narL sirR (family_assigned) — manganese-binding transcriptional regulator MntR sirR parD1 (family_assigned) — type II toxin-antitoxin system ParD family antitox parD1 Rv1167c (family_assigned) — TetR/AcrR family transcriptional regulator Rv1167c Rv0273c (family_assigned) — TetR/AcrR family transcriptional regulator Rv0273c Rv1474c (family_assigned) — helix-turn-helix domain-containing protein Rv1474c Rv0238 (family_assigned) — TetR/AcrR family transcriptional regulator Rv0238 Rv2506 (family_assigned) — TetR/AcrR family transcriptional regulator Rv2506 pth (requalified) — aminoacyl-tRNA hydrolase pth pptT (requalified) — 4'-phosphopantetheinyl transferase pptT lsr2 (requalified) — histone-like nucleoid-structuring protein Lsr2 lsr2 TB7.3 (requalified) — biotin/lipoyl-binding carrier protein TB7.3 Rv0845 (requalified) — sensor histidine kinase NarS Rv0845 devS (requalified) — two-component system sensor histidine kinase DevS devS dosT (requalified) — two-component system sensor histidine kinase DosT dosT sigJ (family_assigned) — sigma-70 family RNA polymerase sigma factor SigJ sigJ Rv1725c (family_assigned) — winged helix-turn-helix transcriptional regulator Rv1725c Rv3066 (family_assigned) — TetR/AcrR family transcriptional regulator Rv3066 Rv2488c (family_assigned) — LuxR family transcriptional regulator Rv2488c Rv1019 (family_assigned) — TetR/AcrR family transcriptional regulator Rv1019 parE1 (family_assigned) — type II toxin-antitoxin system RelE/ParE family to parE1 vapC30 (requalified) — type II toxin-antitoxin system toxin ribonuclease vapC30 cobB (requalified) — NAD-dependent protein deacylase cobB lrpA (family_assigned) — transcriptional regulator LrpA lrpA Rv3488 (family_assigned) — PadR family transcriptional regulator Rv3488 nadR (requalified) — nicotinamide-nucleotide adenylyltransferase nadR Rv3167c (family_assigned) — TetR/AcrR family transcriptional regulator Rv3167c Rv3055 (family_assigned) — helix-turn-helix domain-containing protein Rv3055 Rv1556 (family_assigned) — TetR/AcrR family transcriptional regulator Rv1556 embR (requalified) — response regulator transcription factor EmbR embR Rv0653c (family_assigned) — TetR/AcrR family transcriptional regulator Rv0653c Rv0272c (family_assigned) — alpha/beta hydrolase Rv0272c Rv0274 (family_assigned) — VOC family protein Rv0274 mftR (family_assigned) — mycofactocin system transcriptional regulator mftR Rv0674 (family_assigned) — PaaX family transcriptional regulator C-terminal d Rv0674 trcR (requalified) — two-component system response regulator TrcR trcR moxR3 (family_assigned) — MoxR family ATPase moxR3 acn (requalified) — iron-regulated aconitate hydratase Acn acn 35kd_ag (family_assigned) — hypothetical protein 35kd_ag Rv2179c (requalified) — polyadenylate-specific 3'-exoribonuclease AS Rv2179c Rv0948c (requalified) — chorismate mutase Rv0948c lprD (family_assigned) — hypothetical protein lprD lpqI (requalified) — lipoprotein LpqI lpqI vapB24 (requalified) — antitoxin vapB24 vapC24 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC24

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.