MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3201c · 45 genes shown · anchor adnA · open gene page → · ← back to 1 hop

Evidence: Min score 0
adnB (requalified) — ATP-dependent DNA helicase AdnB adnB adnA (requalified) — ATP-dependent DNA helicase AdnA adnA uvrD2 (requalified) — ATP-dependent DNA helicase UvrD2 uvrD2 uvrD1 (requalified) — ATP-dependent DNA helicase UvrD uvrD1 Rv3200c (family_assigned) — potassium channel family protein Rv3200c nudC (requalified) — NAD(+) diphosphatase nudC pheT (family_assigned) — phenylalanine--tRNA ligase subunit beta pheT recA (requalified) — intein-containing recombinase RecA recA Rv1157c (dark) — hypothetical protein Rv1157c polA (requalified) — DNA polymerase I polA dnaB (requalified) — replicative DNA helicase dnaB dnaN (family_assigned) — DNA polymerase III subunit beta dnaN priA (family_assigned) — primosomal protein N' priA Rv2191 (family_assigned) — hypothetical protein Rv2191 radA (requalified) — DNA repair protein RadA radA uvrB (family_assigned) — excinuclease ABC subunit UvrB uvrB mku (requalified) — Ku protein mku Rv0948c (requalified) — chorismate mutase Rv0948c fmu (requalified) — 16S rRNA m5C967 methyltransferase fmu hemD (requalified) — uroporphyrin-III C-methyltransferase hemD cobB (requalified) — NAD-dependent protein deacylase cobB nadE (requalified) — NAD(+) synthase nadE cinA (requalified) — competence/damage-inducible protein A cinA pncB1 (requalified) — nicotinate phosphoribosyltransferase pncB1 pncB2 (requalified) — nicotinate phosphoribosyltransferase pncB2 nadC (requalified) — carboxylating nicotinate-nucleotide diphosphorylas nadC pheS (family_assigned) — phenylalanine--tRNA ligase subunit alpha pheS leuS (requalified) — leucine--tRNA ligase leuS ileS (requalified) — isoleucine--tRNA ligase ileS rpsB (requalified) — 30S ribosomal protein S2 rpsB rpoB (family_assigned) — DNA-directed RNA polymerase subunit beta rpoB rplO (requalified) — 50S ribosomal protein L15 rplO recX (requalified) — recombination regulator RecX recX lexA (requalified) — transcriptional repressor LexA lexA Rv2090 (requalified) — 5'-3' exonuclease Rv2090 Rv1158c (dark) — hypothetical protein Rv1158c Rv2721c (family_assigned) — LGFP repeat-containing protein Rv2721c ripA (family_assigned) — NlpC/P60 family peptidoglycan endopeptidase RipA ripA pirG (requalified) — exported repetitive protein pirG ftsW (family_assigned) — putative lipid II flippase FtsW ftsW lppK (family_assigned) — hypothetical protein lppK Rv1277 (family_assigned) — hypothetical protein Rv1277 Rv2529 (family_assigned) — hypothetical protein Rv2529 Rv1278 (family_assigned) — AAA family ATPase Rv1278 dnaG (requalified) — DNA primase dnaG

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.