MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3198c · 46 genes shown · anchor adnA · open gene page → · ← back to 1 hop

Evidence: Min score 0
uvrD2 (requalified) — ATP-dependent DNA helicase UvrD2 uvrD2 adnB (requalified) — ATP-dependent DNA helicase AdnB adnB uvrD1 (requalified) — ATP-dependent DNA helicase UvrD uvrD1 adnA (requalified) — ATP-dependent DNA helicase AdnA adnA recA (requalified) — intein-containing recombinase RecA recA uvrB (family_assigned) — excinuclease ABC subunit UvrB uvrB dnaN (family_assigned) — DNA polymerase III subunit beta dnaN Rv3198A (requalified) — glutaredoxin protein Rv3198A uvrA (family_assigned) — excinuclease ABC subunit UvrA uvrA mku (requalified) — Ku protein mku dnaG (requalified) — DNA primase dnaG pheT (family_assigned) — phenylalanine--tRNA ligase subunit beta pheT rpoB (family_assigned) — DNA-directed RNA polymerase subunit beta rpoB Rv3200c (family_assigned) — potassium channel family protein Rv3200c nudC (requalified) — NAD(+) diphosphatase nudC Rv0948c (requalified) — chorismate mutase Rv0948c Rv2191 (family_assigned) — hypothetical protein Rv2191 radA (requalified) — DNA repair protein RadA radA recX (requalified) — recombination regulator RecX recX polA (requalified) — DNA polymerase I polA lexA (requalified) — transcriptional repressor LexA lexA Rv2090 (requalified) — 5'-3' exonuclease Rv2090 uvrC (family_assigned) — excinuclease ABC subunit UvrC uvrC Rv1634 (requalified) — MFS transporter Rv1634 dnaE1 (family_assigned) — DNA polymerase III subunit alpha dnaE1 Rv2413c (family_assigned) — DNA polymerase III subunit delta Rv2413c Rv3644c (family_assigned) — DNA polymerase III subunit delta' Rv3644c dnaZX (family_assigned) — DNA polymerase III subunits gamma/tau dnaZX dnaA (requalified) — chromosomal replication initiator protein DnaA dnaA nrdE (family_assigned) — ribonucleoside-diphosphate reductase subunit alpha nrdE nrdZ (requalified) — adenosylcobalamin-dependent ribonucleoside-diphosp nrdZ lpqQ (family_assigned) — sensor domain-containing protein lpqQ msrA (requalified) — peptide-methionine (S)-S-oxide reductase MsrA msrA mshB (requalified) — N-acetyl-1-D-myo-inositol-2-amino-2-deoxy-alpha-D- mshB mfd (requalified) — transcription-repair coupling factor mfd Rv1637c (family_assigned) — hypothetical protein Rv1637c ligD (requalified) — ATP-dependent DNA ligase ligD ligD (requalified) — non-homologous end-joining DNA ligase ligD Rv0269c (requalified) — DNA polymerase domain-containing protein Rv0269c ligC (requalified) — ATP-dependent DNA ligase ligC ligB (requalified) — ATP-dependent DNA ligase ligB dnaB (requalified) — replicative DNA helicase dnaB dgt (requalified) — deoxyguanosinetriphosphate triphosphohydrolase dgt engA (requalified) — ribosome biogenesis GTPase Der engA rphA (requalified) — ribonuclease PH rphA sigA (requalified) — RNA polymerase sigma factor sigA

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.