MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3193c · 44 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv3193c (family_assigned) — UPF0182 family protein Rv3193c Rv3194c (family_assigned) — PDZ domain-containing protein Rv3194c Rv3195 (requalified) — zinc-dependent metalloprotease Rv3195 Rv3196 (family_assigned) — hypothetical protein Rv3196 lprN (family_assigned) — Mce family lipoprotein LprN lprN istB (family_assigned) — IS21-like element ISMt2 family helper ATPase IstB istB trpG (requalified) — anthranilate synthase component II trpG nrdF2 (family_assigned) — ribonucleoside-diphosphate reductase subunit beta nrdF2 Rv3428c (requalified) — transposase Rv3428c Rv3188 (family_assigned) — antitoxin Xre/MbcA/ParS toxin-binding domain-conta Rv3188 Rv3231c (family_assigned) — hypothetical protein Rv3231c wag31 (requalified) — cell wall synthesis protein Wag31 wag31 whiA (family_assigned) — DNA-binding protein WhiA whiA whiB1 (family_assigned) — transcriptional regulator WhiB1 whiB1 clpP2 (family_assigned) — ATP-dependent CLP protease proteolytic subunit Clp clpP2 Rv1998c (family_assigned) — isocitrate lyase/phosphoenolpyruvate mutase family Rv1998c Rv1830 (family_assigned) — HTH-type transcriptional regulator Rv1830 Rv2413c (family_assigned) — DNA polymerase III subunit delta Rv2413c Rv3446c (family_assigned) — type VII secretion-associated protein Rv3446c moaX (requalified) — MoaD-MoaE fusion protein MoaX moaX eccD4 (family_assigned) — type VII secretion system ESX-4 subunit EccD4 eccD4 mycP4 (requalified) — type VII secretion system ESX-4 serine protease my mycP4 thiS (requalified) — sulfur carrier protein ThiS thiS mce4D (family_assigned) — virulence factor Mce family protein mce4D mce4C (family_assigned) — virulence factor Mce family protein mce4C mce4B (family_assigned) — virulence factor Mce family protein mce4B mce4F (family_assigned) — virulence factor Mce family protein mce4F yrbE4B (family_assigned) — ABC transporter permease yrbE4B Rv3492c (requalified) — Mce associated protein Rv3492c dnaB (requalified) — replicative DNA helicase dnaB Rv2943 (requalified) — insertion sequence element IS1533 transposase Rv2943 Rv2943A (requalified) — transposase Rv2943A Rv0071 (family_assigned) — reverse transcriptase domain-containing protein Rv0071 Rv1005c (requalified) — para-aminobenzoate synthase component I Rv1005c trpE (requalified) — anthranilate synthase component I trpE trpD (requalified) — anthranilate phosphoribosyltransferase trpD trpC (requalified) — indole-3-glycerol phosphate synthase TrpC trpC mbtI (requalified) — salicylate synthase mbtI trpB (family_assigned) — tryptophan synthase subunit beta trpB nrdE (family_assigned) — ribonucleoside-diphosphate reductase subunit alpha nrdE nrdZ (requalified) — adenosylcobalamin-dependent ribonucleoside-diphosp nrdZ nrdI (requalified) — class Ib ribonucleoside-diphosphate reductase asse nrdI Rv3047c (dark) — hypothetical protein Rv3047c nrdF1 (family_assigned) — ribonucleoside-diphosphate reductase subunit beta nrdF1

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.