MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3189 · 43 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv3189 (family_assigned) — RES family NAD+ phosphorylase Rv3189 Rv3188 (family_assigned) — antitoxin Xre/MbcA/ParS toxin-binding domain-conta Rv3188 Rv2035 (family_assigned) — SRPBCC family protein Rv2035 Rv0837c (family_assigned) — type IV toxin-antitoxin system AbiEi family antito Rv0837c Rv1989c (family_assigned) — RES family NAD+ phosphorylase Rv1989c Rv2034 (family_assigned) — metalloregulator ArsR/SmtB family transcription fa Rv2034 Rv0836c (family_assigned) — hypothetical protein Rv0836c Rv1044 (family_assigned) — type IV toxin-antitoxin system AbiEi family antito Rv1044 relF (requalified) — type II toxin-antitoxin system antitoxin RelF relF relG (family_assigned) — type II toxin-antitoxin system RelE/ParE family to relG vapC3 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC3 Rv2022c (family_assigned) — type II toxin-antitoxin system RelE/ParE family to Rv2022c Rv2036 (family_assigned) — maleylpyruvate isomerase family mycothiol-dependen Rv2036 Rv2033c (family_assigned) — DUF3097 domain-containing protein Rv2033c Rv3351c (family_assigned) — hypothetical protein Rv3351c Rv3071 (family_assigned) — DUF190 domain-containing protein Rv3071 Rv3295 (family_assigned) — TetR/AcrR family transcriptional regulator Rv3295 PPE8 (family_assigned) — PPE family protein PPE8 PPE8 PE_PGRS28 (family_assigned) — PE-PGRS family protein PE_PGRS28 PE_PGRS28 PE_PGRS43 (family_assigned) — PE-PGRS family protein PE_PGRS43 PE_PGRS43 PPE55 (family_assigned) — PPE family protein PPE55 PPE55 Rv1004c (family_assigned) — hypothetical protein Rv1004c Rv1990c (family_assigned) — antitoxin Xre/MbcA/ParS toxin-binding domain-conta Rv1990c pncB1 (requalified) — nicotinate phosphoribosyltransferase pncB1 sigI (requalified) — RNA polymerase sigma factor SigI sigI sigJ (family_assigned) — sigma-70 family RNA polymerase sigma factor SigJ sigJ cmtR (family_assigned) — Cd(II)/Pb(II)-sensing metalloregulatory transcript cmtR PPE56 (family_assigned) — PPE family protein PPE56 PPE56 Rv1045 (family_assigned) — nucleotidyl transferase AbiEii/AbiGii toxin family Rv1045 Rv3190c (dark) — hypothetical protein Rv3190c Rv1043c (requalified) — serine protease Rv1043c Rv2826c (family_assigned) — nucleotidyl transferase AbiEii/AbiGii toxin family Rv2826c relE (requalified) — type II toxin-antitoxin system mRNA interferase Re relE relK (family_assigned) — Txe/YoeB family addiction module toxin relK mazF2 (family_assigned) — type II toxin-antitoxin system PemK/MazF family to mazF2 mazF5 (family_assigned) — type II toxin-antitoxin system PemK/MazF family to mazF5 Rv2864c (family_assigned) — penicillin-binding protein Rv2864c relB (family_assigned) — type II toxin-antitoxin system Phd/YefM family ant relB relJ (requalified) — type II toxin-antitoxin system antitoxin RelJ relJ vapB3 (family_assigned) — type II toxin-antitoxin system CcdA family antitox vapB3 vapC9 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC9 Rv3098A (family_assigned) — PemK-like protein Rv3098A vapC46 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC46

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.