MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3182 · 43 genes shown · anchor higA3 · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv3182 (family_assigned) — type II toxin-antitoxin system RelE/ParE family to Rv3182 Rv3183 (family_assigned) — XRE family transcriptional regulator Rv3183 Rv2021c (family_assigned) — XRE family transcriptional regulator Rv2021c Rv3181c (family_assigned) — type II toxin-antitoxin system Phd/YefM family ant Rv3181c Rv3180c (family_assigned) — type II toxin-antitoxin system VapC family toxin Rv3180c higA (requalified) — type II toxin-antitoxin system antitoxin HigA higA Rv3750c (requalified) — excisionase Rv3750c Rv0298 (family_assigned) — ribbon-helix-helix protein%2C CopG family Rv0298 relJ (requalified) — type II toxin-antitoxin system antitoxin RelJ relJ Rv3749c (family_assigned) — hypothetical protein Rv3749c Rv2019 (family_assigned) — hypothetical protein Rv2019 mftR (family_assigned) — mycofactocin system transcriptional regulator mftR Rv3263 (requalified) — class I SAM-dependent methyltransferase Rv3263 Rv3066 (family_assigned) — TetR/AcrR family transcriptional regulator Rv3066 Rv3840 (family_assigned) — transcriptional regulator Rv3840 Rv1776c (family_assigned) — TetR/AcrR family transcriptional regulator Rv1776c Rv2022c (family_assigned) — type II toxin-antitoxin system RelE/ParE family to Rv2022c Rv2023c (dark) — hypothetical protein Rv2023c Rv0744c (family_assigned) — helix-turn-helix domain-containing protein Rv0744c Rv2020c (family_assigned) — Conserved hypothetical protein Rv2020c Rv0332 (family_assigned) — hypothetical protein Rv0332 Rv2308 (family_assigned) — DUF433 domain-containing protein Rv2308 PPE8 (family_assigned) — PPE family protein PPE8 PPE8 PE_PGRS43 (family_assigned) — PE-PGRS family protein PE_PGRS43 PE_PGRS43 PE_PGRS28 (family_assigned) — PE-PGRS family protein PE_PGRS28 PE_PGRS28 PPE55 (family_assigned) — PPE family protein PPE55 PPE55 Rv3098A (family_assigned) — PemK-like protein Rv3098A vapB47 (requalified) — antitoxin VapB47 vapB47 vapC1 (requalified) — type II toxin-antitoxin system ribonuclease VapC1 vapC1 vapC8 (family_assigned) — PIN domain-containing protein vapC8 Rv1957 (requalified) — SecB-like chaperone Rv1957 higB (requalified) — type II toxin-antitoxin system toxin HigB higB PPE56 (family_assigned) — PPE family protein PPE56 PPE56 Rv0836c (family_assigned) — hypothetical protein Rv0836c Rv2018 (family_assigned) — DUF433 domain-containing protein Rv2018 relE (requalified) — type II toxin-antitoxin system mRNA interferase Re relE Rv0299 (requalified) — toxin-antitoxin system toxin Rv0299 vapB2 (requalified) — type II toxin-antitoxin system antitoxin VapB2 vapB2 vapC2 (family_assigned) — PIN domain nuclease vapC2 PE_PGRS5 (family_assigned) — PE-PGRS family protein PE_PGRS5 PE_PGRS5 Rv0302 (family_assigned) — TetR/AcrR family transcriptional regulator Rv0302 Rv0303 (requalified) — protochlorophyllide reductase Rv0303 relK (family_assigned) — Txe/YoeB family addiction module toxin relK

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.