MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3180c · 44 genes shown · anchor vapB49 · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv3180c (family_assigned) — type II toxin-antitoxin system VapC family toxin Rv3180c Rv3181c (family_assigned) — type II toxin-antitoxin system Phd/YefM family ant Rv3181c Rv3098A (family_assigned) — PemK-like protein Rv3098A vapB47 (requalified) — antitoxin VapB47 vapB47 vapC1 (requalified) — type II toxin-antitoxin system ribonuclease VapC1 vapC1 vapC8 (family_assigned) — PIN domain-containing protein vapC8 Rv3183 (family_assigned) — XRE family transcriptional regulator Rv3183 Rv3182 (family_assigned) — type II toxin-antitoxin system RelE/ParE family to Rv3182 vapC12 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC12 vapC4 (requalified) — type II toxin-antitoxin system toxin ribonuclease vapC4 vapC9 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC9 Rv2560 (family_assigned) — DUF2189 domain-containing protein Rv2560 vapB43 (family_assigned) — ribbon-helix-helix domain-containing protein vapB43 Rv2308 (family_assigned) — DUF433 domain-containing protein Rv2308 PPE8 (family_assigned) — PPE family protein PPE8 PPE8 PE_PGRS43 (family_assigned) — PE-PGRS family protein PE_PGRS43 PE_PGRS43 PE_PGRS28 (family_assigned) — PE-PGRS family protein PE_PGRS28 PE_PGRS28 PPE55 (family_assigned) — PPE family protein PPE55 PPE55 vapC3 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC3 mazE9 (requalified) — antitoxin MazE9 mazE9 vapC47 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC47 vapC35 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC35 vapC46 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC46 Rv3406 (requalified) — alpha-ketoglutarate-dependent sulfate ester dioxyg Rv3406 vapB1 (requalified) — antitoxin VapB1 vapB1 Rv0064 (family_assigned) — UPF0182 family protein Rv0064 vapB5 (family_assigned) — type II toxin-antitoxin system Phd/YefM family ant vapB5 vapB8 (requalified) — antitoxin VapB8 vapB8 vapB4 (requalified) — type II toxin-antitoxin system antitoxin VapB4 vapB4 Rv0666 (dark) — hypothetical protein Rv0666 atsD (requalified) — arylsulfatase AtsD atsD mftR (family_assigned) — mycofactocin system transcriptional regulator mftR Rv3263 (requalified) — class I SAM-dependent methyltransferase Rv3263 Rv3066 (family_assigned) — TetR/AcrR family transcriptional regulator Rv3066 Rv3840 (family_assigned) — transcriptional regulator Rv3840 Rv1776c (family_assigned) — TetR/AcrR family transcriptional regulator Rv1776c Rv2021c (family_assigned) — XRE family transcriptional regulator Rv2021c vapB12 (requalified) — antitoxin vapB12 vapC31 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC31 Rv0597c (family_assigned) — ATP-binding protein Rv0597c Rv3479 (requalified) — transmembrane protein Rv3479 vapC48 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC48 vapB9 (requalified) — antitoxin VapB9 vapB9 Rv0959 (family_assigned) — VWA domain-containing protein Rv0959

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.