MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3173c · 46 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv3173c (family_assigned) — helix-turn-helix domain-containing protein Rv3173c Rv3174 (family_assigned) — SDR family oxidoreductase Rv3174 Rv3172c (dark) — hypothetical protein Rv3172c Rv3175 (requalified) — amidase Rv3175 pth (requalified) — aminoacyl-tRNA hydrolase pth Rv0377 (family_assigned) — LysR family transcriptional regulator Rv0377 Rv0067c (family_assigned) — helix-turn-helix domain-containing protein Rv0067c Rv3833 (family_assigned) — helix-turn-helix transcriptional regulator Rv3833 Rv2034 (family_assigned) — metalloregulator ArsR/SmtB family transcription fa Rv2034 Rv2640c (family_assigned) — Rv2640c family ArsR-like transcriptional regulator Rv2640c lytB2 (requalified) — 4-hydroxy-3-methylbut-2-enyl diphosphate reductase lytB2 ideR (family_assigned) — iron-dependent transcriptional regulator IdeR ideR argR (requalified) — arginine repressor argR Rv1050 (family_assigned) — SDR family oxidoreductase Rv1050 Rv2263 (family_assigned) — SDR family oxidoreductase Rv2263 Rv1941 (family_assigned) — SDR family oxidoreductase Rv1941 hpx (requalified) — non-heme haloperoxidase Hpx hpx gatB (family_assigned) — Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subun gatB acyP (requalified) — acylphosphatase acyP Rv3551 (family_assigned) — CoA transferase subunit A Rv3551 gatC (family_assigned) — Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subun gatC pcd (requalified) — piperideine-6-carboxylic acid dehydrogenase pcd rplY (requalified) — 50S ribosomal protein L25/general stress protein C rplY ychF (requalified) — redox-regulated ATPase YchF ychF mfd (requalified) — transcription-repair coupling factor mfd lpqT (requalified) — lipoprotein LpqT lpqT mesJ (requalified) — tRNA lysidine(34) synthetase TilS mesJ atpH (family_assigned) — F0F1 ATP synthase subunit B/delta atpH Rv0372c (family_assigned) — XdhC family protein Rv0372c Rv0368c (family_assigned) — VWA domain-containing protein Rv0368c Rv0375c (family_assigned) — carbon monoxyde dehydrogenase medium subunit Rv0375c embR (requalified) — response regulator transcription factor EmbR embR Rv1725c (family_assigned) — winged helix-turn-helix transcriptional regulator Rv1725c oxyS (family_assigned) — LysR family transcriptional regulator OxyS oxyS Rv3055 (family_assigned) — helix-turn-helix domain-containing protein Rv3055 Rv3183 (family_assigned) — XRE family transcriptional regulator Rv3183 Rv2488c (family_assigned) — LuxR family transcriptional regulator Rv2488c iniR (family_assigned) — isoniazid response ATPase/transcriptional regulato iniR Rv1931c (family_assigned) — transcriptional regulator Rv1931c Rv0792c (family_assigned) — GntR family transcriptional regulator Rv0792c Rv2912c (family_assigned) — TetR/AcrR family transcriptional regulator Rv2912c Rv1395 (family_assigned) — HTH-type transcriptional regulator Rv1395 Rv1167c (family_assigned) — TetR/AcrR family transcriptional regulator Rv1167c Rv3830c (family_assigned) — TetR/AcrR family transcriptional regulator Rv3830c Rv1985c (family_assigned) — ArgP/LysG family DNA-binding transcriptional regul Rv1985c Rv2035 (family_assigned) — SRPBCC family protein Rv2035

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.