MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3171c · 38 genes shown · anchor bpoC · open gene page → · ← back to 1 hop

Evidence: Min score 0
hpx (requalified) — non-heme haloperoxidase Hpx hpx bpoC (family_assigned) — alpha/beta hydrolase bpoC ephF (family_assigned) — alpha/beta hydrolase ephF Rv3177 (family_assigned) — alpha/beta hydrolase Rv3177 Rv2296 (requalified) — haloalkane dehalogenase Rv2296 Rv1833c (requalified) — haloalkane dehalogenase Rv1833c Rv3172c (dark) — hypothetical protein Rv3172c pks2 (requalified) — phthioceranic/hydroxyphthioceranic acid synthase pks2 mas (requalified) — mycocerosate synthase mas pks5 (requalified) — sulfolipid-1 biosynthesis phthioceranic/hydroxypht pks5 pks12 (requalified) — type I polyketide synthase pks12 ppsC (requalified) — phthiocerol type I polyketide synthase PpsC ppsC ephC (requalified) — epoxide hydrolase EphC ephC menC (requalified) — o-succinylbenzoate synthase menC Rv0552 (requalified) — amidohydrolase Rv0552 menD (requalified) — 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1 menD Rv0556 (family_assigned) — DUF3592 domain-containing protein Rv0556 mgtA (requalified) — GDP-mannose-dependent alpha-mannosyltransferase mgtA Rv1726 (requalified) — FAD-binding oxidoreductase Rv1726 papA4 (requalified) — polyketide synthase papA4 Rv3175 (requalified) — amidase Rv3175 Rv3178 (requalified) — nitroreductase Rv3178 dhaA (requalified) — haloalkane dehalogenase dhaA adhE1 (family_assigned) — zinc-type alcohol dehydrogenase subunit E adhE1 adhB (requalified) — alcohol dehydrogenase B adhB adhA (family_assigned) — zinc-binding alcohol dehydrogenase family protein adhA adh (requalified) — zinc-binding dehydrogenase adh Rv3173c (family_assigned) — helix-turn-helix domain-containing protein Rv3173c Rv3174 (family_assigned) — SDR family oxidoreductase Rv3174 fas (requalified) — fatty acid synthase fas fabD (requalified) — malonyl CoA-acyl carrier protein transacylase fabD mbtB (requalified) — phenyloxazoline synthase MbtB mbtB papA1 (requalified) — acyltransferase PapA1 papA1 ppsE (requalified) — phthiocerol type I polyketide synthase PpsE ppsE ppsD (requalified) — phthiocerol type I polyketide synthase PpsD ppsD ppsB (requalified) — phthiocerol type I polyketide synthase PpsB ppsB Rv1125 (family_assigned) — WS/DGAT domain-containing protein Rv1125 bpoB (requalified) — peroxidase BpoB bpoB

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.