MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3167c · 44 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv3167c (family_assigned) — TetR/AcrR family transcriptional regulator Rv3167c Rv1167c (family_assigned) — TetR/AcrR family transcriptional regulator Rv1167c Rv3830c (family_assigned) — TetR/AcrR family transcriptional regulator Rv3830c mftR (family_assigned) — mycofactocin system transcriptional regulator mftR Rv1931c (family_assigned) — transcriptional regulator Rv1931c oxyS (family_assigned) — LysR family transcriptional regulator OxyS oxyS Rv0494 (family_assigned) — HTH-type transcriptional regulator Rv0494 sigI (requalified) — RNA polymerase sigma factor SigI sigI Rv1776c (family_assigned) — TetR/AcrR family transcriptional regulator Rv1776c Rv1556 (family_assigned) — TetR/AcrR family transcriptional regulator Rv1556 Rv1674c (family_assigned) — metalloregulator ArsR/SmtB family transcription fa Rv1674c Rv0894 (family_assigned) — hypothetical protein Rv0894 Rv1725c (family_assigned) — winged helix-turn-helix transcriptional regulator Rv1725c Rv3055 (family_assigned) — helix-turn-helix domain-containing protein Rv3055 cobB (requalified) — NAD-dependent protein deacylase cobB embR (requalified) — response regulator transcription factor EmbR embR Rv0653c (family_assigned) — TetR/AcrR family transcriptional regulator Rv0653c Rv1359 (family_assigned) — transcriptional regulator Rv1359 Rv3829c (requalified) — NAD(P)/FAD-dependent oxidoreductase Rv3829c Rv3840 (family_assigned) — transcriptional regulator Rv3840 mftB (requalified) — mycofactocin biosynthesis chaperone MftB mftB mftC (requalified) — mycofactocin radical SAM maturase mftC Rv3183 (family_assigned) — XRE family transcriptional regulator Rv3183 Rv0690c (family_assigned) — DUF2332 domain-containing protein Rv0690c Rv1930c (requalified) — glutamine amidotransferase Rv1930c virS (family_assigned) — AraC family transcriptional regulator virS Rv2488c (family_assigned) — LuxR family transcriptional regulator Rv2488c Rv3736 (family_assigned) — AraC family transcriptional regulator Rv3736 Rv0377 (family_assigned) — LysR family transcriptional regulator Rv0377 kdpE (requalified) — two-component system response regulator KdpE kdpE Rv2282c (family_assigned) — LysR family transcriptional regulator Rv2282c Rv1773c (family_assigned) — IclR family transcriptional regulator Rv1773c Rv0792c (family_assigned) — GntR family transcriptional regulator Rv0792c tcrA (family_assigned) — two component DNA binding transcriptional regulato tcrA Rv1190 (requalified) — alpha/beta fold hydrolase Rv1190 cmr (family_assigned) — HTH-type transcriptional regulator Cmr cmr iniR (family_assigned) — isoniazid response ATPase/transcriptional regulato iniR Rv0452 (family_assigned) — TetR family transcriptional regulator Rv0452 nadR (requalified) — nicotinamide-nucleotide adenylyltransferase nadR moaR1 (family_assigned) — transcriptional regulator MoaR1 moaR1 Rv0891c (family_assigned) — hypothetical protein Rv0891c Rv0895 (requalified) — diacyglycerol O-acyltransferase Rv0895 Rv1724c (dark) — hypothetical protein Rv1724c sigJ (family_assigned) — sigma-70 family RNA polymerase sigma factor SigJ sigJ

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.