MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3164c · 45 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
moxR3 (family_assigned) — MoxR family ATPase moxR3 Rv3163c (dark) — DUF58 domain-containing protein Rv3163c Rv3165c (dark) — hypothetical protein Rv3165c Rv3166c (family_assigned) — DUF4129 domain-containing protein Rv3166c Rv3162c (family_assigned) — integral membrane protein Rv3162c Rv2488c (family_assigned) — LuxR family transcriptional regulator Rv2488c Rv0273c (family_assigned) — TetR/AcrR family transcriptional regulator Rv0273c Rv1725c (family_assigned) — winged helix-turn-helix transcriptional regulator Rv1725c Rv0377 (family_assigned) — LysR family transcriptional regulator Rv0377 kdpE (requalified) — two-component system response regulator KdpE kdpE Rv3263 (requalified) — class I SAM-dependent methyltransferase Rv3263 cmr (family_assigned) — HTH-type transcriptional regulator Cmr cmr Rv3736 (family_assigned) — AraC family transcriptional regulator Rv3736 Rv3099c (family_assigned) — maleylpyruvate isomerase family mycothiol-dependen Rv3099c Rv2423 (requalified) — class I SAM-dependent methyltransferase Rv2423 Rv3167c (family_assigned) — TetR/AcrR family transcriptional regulator Rv3167c Rv3161c (family_assigned) — aromatic ring-hydroxylating dioxygenase subunit al Rv3161c Rv3899c (family_assigned) — hypothetical protein Rv3899c Rv3160c (family_assigned) — helix-turn-helix domain-containing protein Rv3160c embR (requalified) — response regulator transcription factor EmbR embR Rv1931c (family_assigned) — transcriptional regulator Rv1931c sigI (requalified) — RNA polymerase sigma factor SigI sigI Rv1359 (family_assigned) — transcriptional regulator Rv1359 Rv0272c (family_assigned) — alpha/beta hydrolase Rv0272c Rv0274 (family_assigned) — VOC family protein Rv0274 mftR (family_assigned) — mycofactocin system transcriptional regulator mftR Rv0674 (family_assigned) — PaaX family transcriptional regulator C-terminal d Rv0674 trcR (requalified) — two-component system response regulator TrcR trcR Rv1724c (dark) — hypothetical protein Rv1724c Rv3055 (family_assigned) — helix-turn-helix domain-containing protein Rv3055 sigJ (family_assigned) — sigma-70 family RNA polymerase sigma factor SigJ sigJ Rv0372c (family_assigned) — XdhC family protein Rv0372c Rv0368c (family_assigned) — VWA domain-containing protein Rv0368c Rv0375c (family_assigned) — carbon monoxyde dehydrogenase medium subunit Rv0375c oxyS (family_assigned) — LysR family transcriptional regulator OxyS oxyS kdpD (requalified) — sensor histidine kinase KdpD kdpD trcS (family_assigned) — HAMP domain-containing sensor histidine kinase trcS kdpA (family_assigned) — potassium-transporting ATPase subunit KdpA kdpA Rv0600c (requalified) — two component sensor kinase HK1 Rv0600c iniR (family_assigned) — isoniazid response ATPase/transcriptional regulato iniR Rv3840 (family_assigned) — transcriptional regulator Rv3840 Rv1674c (family_assigned) — metalloregulator ArsR/SmtB family transcription fa Rv1674c tcrA (family_assigned) — two component DNA binding transcriptional regulato tcrA Rv2282c (family_assigned) — LysR family transcriptional regulator Rv2282c Rv1985c (family_assigned) — ArgP/LysG family DNA-binding transcriptional regul Rv1985c

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.