MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3161c · 46 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv3161c (family_assigned) — aromatic ring-hydroxylating dioxygenase subunit al Rv3161c Rv3160c (family_assigned) — helix-turn-helix domain-containing protein Rv3160c Rv2776c (requalified) — oxidoreductase Rv2776c Rv3163c (dark) — DUF58 domain-containing protein Rv3163c Rv3162c (family_assigned) — integral membrane protein Rv3162c Rv3166c (family_assigned) — DUF4129 domain-containing protein Rv3166c Rv3165c (dark) — hypothetical protein Rv3165c moxR3 (family_assigned) — MoxR family ATPase moxR3 Rv1937 (requalified) — FAD-binding oxidoreductase Rv1937 PPE53 (family_assigned) — PPE family protein PPE53 PPE53 Rv1215c (family_assigned) — CocE/NonD family hydrolase Rv1215c Rv0316 (family_assigned) — muconolactone Delta-isomerase family protein Rv0316 fdxB (requalified) — fatty acid desaturase fdxB mmpL5 (requalified) — siderophore RND transporter MmpL5 mmpL5 mmpR5 (family_assigned) — siderophore transport transcriptional regulator Mm mmpR5 Rv0560c (requalified) — benzoquinone methyltransferase Rv0560c Rv0674 (family_assigned) — PaaX family transcriptional regulator C-terminal d Rv0674 Rv3066 (family_assigned) — TetR/AcrR family transcriptional regulator Rv3066 cyp123 (requalified) — cytochrome P450 cyp123 cyp142 (requalified) — steroid C26-monooxygenase Cyp142 cyp142 Rv2777c (requalified) — metal-dependent hydrolase Rv2777c Rv1465 (family_assigned) — SUF system NifU family Fe-S cluster assembly prote Rv1465 iscS (family_assigned) — cysteine desulfurase family protein iscS cyp141 (requalified) — cytochrome P450 Cyp141 cyp141 Rv3099c (family_assigned) — maleylpyruvate isomerase family mycothiol-dependen Rv3099c Rv2423 (requalified) — class I SAM-dependent methyltransferase Rv2423 Rv3899c (family_assigned) — hypothetical protein Rv3899c Rv3167c (family_assigned) — TetR/AcrR family transcriptional regulator Rv3167c Rv2488c (family_assigned) — LuxR family transcriptional regulator Rv2488c Rv0273c (family_assigned) — TetR/AcrR family transcriptional regulator Rv0273c fadH (requalified) — NADPH-dependent 2%2C4-dienoyl-CoA reductase fadH fprB (requalified) — FAD-dependent oxidoreductase fprB fprA (requalified) — ferredoxin--NADP(+) reductase FprA fprA gltD (family_assigned) — glutamate synthase subunit beta gltD ephB (requalified) — epoxide hydrolase EphB ephB ribA1 (requalified) — riboflavin biosynthesis protein RibA ribA1 PE_PGRS23 (family_assigned) — PE-PGRS family protein PE_PGRS23 PE_PGRS23 PE_PGRS2 (family_assigned) — PE-PGRS family protein PE_PGRS2 PE_PGRS2 PE_PGRS48 (family_assigned) — PE-PGRS family protein PE_PGRS48 PE_PGRS48 Rv2082 (dark) — DUF5631 domain-containing protein Rv2082 Rv1004c (family_assigned) — hypothetical protein Rv1004c PE_PGRS28 (family_assigned) — PE-PGRS family protein PE_PGRS28 PE_PGRS28 Rv1217c (family_assigned) — multidrug efflux ABC transporter permease Rv1217c Rv1216c (family_assigned) — isoprenylcysteine carboxylmethyltransferase family Rv1216c raaS (family_assigned) — transcriptional regulator RaaS raaS Rv1218c (family_assigned) — multidrug efflux ABC transporter ATP-binding prote Rv1218c

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.