MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3160c · 46 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv3160c (family_assigned) — helix-turn-helix domain-containing protein Rv3160c mmpL5 (requalified) — siderophore RND transporter MmpL5 mmpL5 mmpR5 (family_assigned) — siderophore transport transcriptional regulator Mm mmpR5 Rv3161c (family_assigned) — aromatic ring-hydroxylating dioxygenase subunit al Rv3161c Rv0560c (requalified) — benzoquinone methyltransferase Rv0560c Rv0674 (family_assigned) — PaaX family transcriptional regulator C-terminal d Rv0674 Rv3066 (family_assigned) — TetR/AcrR family transcriptional regulator Rv3066 Rv3060c (family_assigned) — FCD domain-containing protein Rv3060c Rv3183 (family_assigned) — XRE family transcriptional regulator Rv3183 ethR (family_assigned) — HTH-type transcriptional regulator EthR ethR Rv1725c (family_assigned) — winged helix-turn-helix transcriptional regulator Rv1725c Rv3167c (family_assigned) — TetR/AcrR family transcriptional regulator Rv3167c Rv3162c (family_assigned) — integral membrane protein Rv3162c mmpS5 (requalified) — siderophore transporter accessory protein MmpS5 mmpS5 Rv1598c (family_assigned) — nitroreductase family deazaflavin-dependent oxidor Rv1598c eccD3 (family_assigned) — type VII secretion system ESX-3 subunit EccD3 eccD3 Rv1303 (family_assigned) — ATP synthase subunit I Rv1303 Rv1152 (family_assigned) — GntR family transcriptional regulator Rv1152 Rv0792c (family_assigned) — GntR family transcriptional regulator Rv0792c Rv2776c (requalified) — oxidoreductase Rv2776c Rv3163c (dark) — DUF58 domain-containing protein Rv3163c Rv3166c (family_assigned) — DUF4129 domain-containing protein Rv3166c Rv3165c (dark) — hypothetical protein Rv3165c menJ (requalified) — menaquinone reductase menJ Rv0559c (family_assigned) — DUF732 domain-containing protein Rv0559c grcC1 (requalified) — polyprenyl-diphosphate synthase GrcC grcC1 echA4 (family_assigned) — crotonase/enoyl-CoA hydratase family protein echA4 echA5 (requalified) — enoyl-CoA hydratase EchA5 echA5 fadE8 (family_assigned) — acyl-CoA dehydrogenase family protein fadE8 Rv0273c (family_assigned) — TetR/AcrR family transcriptional regulator Rv0273c moxR2 (family_assigned) — MoxR family ATPase moxR2 Rv3263 (requalified) — class I SAM-dependent methyltransferase Rv3263 mmr (requalified) — multidrug resistance protein Mmr mmr sirR (family_assigned) — manganese-binding transcriptional regulator MntR sirR mftR (family_assigned) — mycofactocin system transcriptional regulator mftR Rv1167c (family_assigned) — TetR/AcrR family transcriptional regulator Rv1167c Rv3055 (family_assigned) — helix-turn-helix domain-containing protein Rv3055 Rv3182 (family_assigned) — type II toxin-antitoxin system RelE/ParE family to Rv3182 Rv3840 (family_assigned) — transcriptional regulator Rv3840 Rv1776c (family_assigned) — TetR/AcrR family transcriptional regulator Rv1776c Rv0158 (family_assigned) — TetR/AcrR family transcriptional regulator Rv0158 Rv1985c (family_assigned) — ArgP/LysG family DNA-binding transcriptional regul Rv1985c vapC30 (requalified) — type II toxin-antitoxin system toxin ribonuclease vapC30 Rv1019 (family_assigned) — TetR/AcrR family transcriptional regulator Rv1019 Rv1931c (family_assigned) — transcriptional regulator Rv1931c Rv1724c (dark) — hypothetical protein Rv1724c

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.