MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3139 · 46 genes shown · anchor fadE23 · open gene page → · ← back to 1 hop

Evidence: Min score 0
fadE24 (family_assigned) — acyl-CoA dehydrogenase family protein fadE24 fadE23 (family_assigned) — acyl-CoA dehydrogenase family protein fadE23 fixA (family_assigned) — electron transfer flavoprotein subunit beta/FixA f fixA fixB (family_assigned) — electron transfer flavoprotein subunit alpha/FixB fixB fadB (requalified) — fatty oxidation protein FadB fadB pflA (requalified) — AmmeMemoRadiSam system radical SAM enzyme pflA fadE16 (family_assigned) — acyl-CoA dehydrogenase family protein fadE16 fadA2 (requalified) — acetyl-CoA C-acetyltransferase fadA2 htdX (requalified) — 3-hydroxyacyl-thioester dehydratase HtdX htdX mbtN (requalified) — acyl-ACP dehydrogenase MbtN mbtN nuoI (family_assigned) — NADH-quinone oxidoreductase subunit NuoI nuoI fadE32 (family_assigned) — acyl-CoA dehydrogenase family protein fadE32 fadB4 (family_assigned) — NADPH:quinone oxidoreductase family protein fadB4 ltp1 (requalified) — lipid-transfer protein ltp1 accD1 (family_assigned) — acetyl-/propionyl-CoA carboxylase subunit beta accD1 fadE7 (requalified) — acyl-CoA dehydrogenase fadE7 echA6 (requalified) — enoyl-CoA hydratase echA6 fadH (requalified) — NADPH-dependent 2%2C4-dienoyl-CoA reductase fadH fadE19 (family_assigned) — acyl-CoA dehydrogenase family protein fadE19 fadE25 (requalified) — acyl-CoA dehydrogenase fadE25 fadE13 (family_assigned) — acyl-CoA dehydrogenase family protein fadE13 fadE21 (family_assigned) — acyl-CoA dehydrogenase family protein fadE21 fadE20 (family_assigned) — acyl-CoA dehydrogenase family protein fadE20 fadA (requalified) — acetyl-CoA C-acetyltransferase fadA fadA4 (requalified) — acetyl-CoA acetyltransferase fadA4 fadA6 (requalified) — acetyl-CoA C-acetyltransferase fadA6 Rv1867 (requalified) — acetyl-CoA acetyltransferase Rv1867 ltp3 (family_assigned) — thiolase domain-containing protein ltp3 hisN (requalified) — histidinol-phosphatase hisN Rv3136A (dark) — hypothetical protein Rv3136A nirB (family_assigned) — nitrite reductase large subunit NirB nirB Rv1869c (requalified) — FAD-dependent oxidoreductase Rv1869c Rv1680 (family_assigned) — phosphate/phosphite/phosphonate ABC transporter su Rv1680 moeX (requalified) — radical SAM protein moeX Rv1678 (family_assigned) — hypothetical protein Rv1678 fabG4 (requalified) — 3-oxoacyl-ACP reductase fabG4 fadB3 (requalified) — 3-hydroxybutyryl-CoA dehydrogenase FadB fadB3 fadB2 (requalified) — 3-hydroxybutyryl-CoA dehydrogenase FadB2 fadB2 acs (requalified) — acetate--CoA ligase acs fadE8 (family_assigned) — acyl-CoA dehydrogenase family protein fadE8 mbtM (requalified) — long-chain-fatty acid--ACP ligase MbtM mbtM mbtL (requalified) — acyl carrier protein MbtL mbtL fadE18 (family_assigned) — acyl-CoA dehydrogenase family protein fadE18 nuoC (family_assigned) — NADH-quinone oxidoreductase subunit C nuoC nuoN (family_assigned) — NADH-quinone oxidoreductase subunit NuoN nuoN nuoJ (family_assigned) — NADH-quinone oxidoreductase subunit J nuoJ

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.