MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3138 · 46 genes shown · anchor hisN · open gene page → · ← back to 1 hop

Evidence: Min score 0
pflA (requalified) — AmmeMemoRadiSam system radical SAM enzyme pflA hisN (requalified) — histidinol-phosphatase hisN fadE24 (family_assigned) — acyl-CoA dehydrogenase family protein fadE24 Rv3136A (dark) — hypothetical protein Rv3136A fadE23 (family_assigned) — acyl-CoA dehydrogenase family protein fadE23 nirB (family_assigned) — nitrite reductase large subunit NirB nirB Rv1869c (requalified) — FAD-dependent oxidoreductase Rv1869c Rv3818 (requalified) — MBL fold metallo-hydrolase Rv3818 Rv0688 (requalified) — FAD/NAD(P)-binding oxidoreductase Rv0688 nirD (family_assigned) — nitrite reductase small subunit NirD nirD xylB (requalified) — FGGY-family carbohydrate kinase xylB Rv2633c (requalified) — non-heme di-iron catalase Rv2633c cobU (requalified) — bifunctional adenosylcobinamide kinase/adenosylcob cobU hisD (requalified) — histidinol dehydrogenase hisD hisC1 (requalified) — histidinol-phosphate aminotransferase hisC1 cobC (requalified) — aminotransferase cobC hisC2 (requalified) — histidinol-phosphate transaminase hisC2 fixA (family_assigned) — electron transfer flavoprotein subunit beta/FixA f fixA fixB (family_assigned) — electron transfer flavoprotein subunit alpha/FixB fixB fadB (requalified) — fatty oxidation protein FadB fadB fadE16 (family_assigned) — acyl-CoA dehydrogenase family protein fadE16 ltp1 (requalified) — lipid-transfer protein ltp1 accD1 (family_assigned) — acetyl-/propionyl-CoA carboxylase subunit beta accD1 fadE7 (requalified) — acyl-CoA dehydrogenase fadE7 echA6 (requalified) — enoyl-CoA hydratase echA6 narG (family_assigned) — nitrate reductase subunit alpha narG narX (family_assigned) — respiratory nitrate reductase subunit gamma narX narU (family_assigned) — NarK family nitrate/nitrite MFS transporter narU narK3 (requalified) — nitrate/nitrite transporter narK3 narK1 (requalified) — nitrate/nitrite transporter narK1 Rv1870c (family_assigned) — hypothetical protein Rv1870c rubA (requalified) — rubredoxin rubA rubB (requalified) — rubredoxin RubB rubB Rv1871c (family_assigned) — nitroreductase family deazaflavin-dependent oxidor Rv1871c Rv3819 (dark) — hypothetical protein Rv3819 hemD (requalified) — uroporphyrin-III C-methyltransferase hemD cysG (requalified) — uroporphyrinogen-III C-methyltransferase cysG Rv0687 (family_assigned) — Rv0687 family mycofactocin-dependent SDR oxidoredu Rv0687 narH (family_assigned) — nitrate reductase subunit beta narH narI (family_assigned) — respiratory nitrate reductase subunit gamma narI rpe (requalified) — ribulose-phosphate 3-epimerase rpe fucA (requalified) — L-fuculose-phosphate aldolase fucA serA2 (requalified) — D-3-phosphoglycerate dehydrogenase SerA serA2 Rv0730 (requalified) — GCN5-like N-acetyltransferase Rv0730 Rv3575c (family_assigned) — LacI family DNA-binding transcriptional regulator Rv3575c Rv1006 (family_assigned) — hypothetical protein Rv1006

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.